Analysis of interatomic Contacts of Structural Units in PDB entry:
1OLP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OLP entry

There are 4 chains in PDB entry 1OLP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 1LYS 370
B
 TRP 1LYS 370
C
 TRP 1LYS 370
D
 TRP 1LYS 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 1OLP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
31 44Right-handed alpha
Helix 3
3
A
44 54Right-handed alpha
Helix 4
4
A
55 58Right-handed 310
Helix 5
5
A
65 69Right-handed 310
Helix 6
6
A
77 82Right-handed alpha
Helix 7
7
A
83 89Right-handed 310
Helix 8
8
A
93 112Right-handed alpha
Helix 9
9
A
113 132Right-handed alpha
Helix 10
10
A
133 138Right-handed alpha
Helix 11
11
A
145 159Right-handed alpha
Helix 12
12
A
160 163Right-handed 310
Helix 13
13
A
173 178Right-handed alpha
Helix 14
14
A
179 181Right-handed 310
Helix 15
15
A
184 208Right-handed alpha
Helix 16
16
A
213 245Right-handed alpha
Helix 17
17
A
317 319Right-handed 310
Helix 18
18
B
9 26Right-handed alpha
Helix 19
19
B
31 44Right-handed alpha
Helix 20
20
B
44 54Right-handed alpha
Helix 21
21
B
55 58Right-handed 310
Helix 22
22
B
65 69Right-handed 310
Helix 23
23
B
77 82Right-handed alpha
Helix 24
24
B
83 89Right-handed 310
Helix 25
25
B
93 112Right-handed alpha
Helix 26
26
B
113 132Right-handed alpha
Helix 27
27
B
133 138Right-handed alpha
Helix 28
28
B
146 159Right-handed alpha
Helix 29
29
B
160 163Right-handed 310
Helix 30
30
B
173 182Right-handed alpha
Helix 31
31
B
184 208Right-handed alpha
Helix 32
32
B
213 245Right-handed alpha
Helix 33
33
C
9 26Right-handed alpha
Helix 34
34
C
31 44Right-handed alpha
Helix 35
35
C
44 54Right-handed alpha
Helix 36
36
C
55 57Right-handed 310
Helix 37
37
C
65 69Right-handed 310
Helix 38
38
C
77 82Right-handed alpha
Helix 39
39
C
83 89Right-handed 310
Helix 40
40
C
93 111Right-handed alpha
Helix 41
41
C
113 131Right-handed alpha
Helix 42
42
C
133 138Right-handed alpha
Helix 43
43
C
146 159Right-handed alpha
Helix 44
44
C
160 163Right-handed 310
Helix 45
45
C
173 178Right-handed alpha
Helix 46
46
C
184 208Right-handed alpha
Helix 47
47
C
213 243Right-handed alpha
Helix 48
48
D
9 26Right-handed alpha
Helix 49
49
D
31 44Right-handed alpha
Helix 50
50
D
44 54Right-handed alpha
Helix 51
51
D
55 58Right-handed 310
Helix 52
52
D
65 69Right-handed 310
Helix 53
53
D
77 82Right-handed alpha
Helix 54
54
D
83 89Right-handed 310
Helix 55
55
D
93 111Right-handed alpha
Helix 56
56
D
113 132Right-handed alpha
Helix 57
57
D
133 138Right-handed alpha
Helix 58
58
D
146 158Right-handed alpha
Helix 59
59
D
159 163Right-handed 310
Helix 60
60
D
173 182Right-handed alpha
Helix 61
61
D
184 208Right-handed alpha
Helix 62
62
D
213 243Right-handed alpha
Helix 63
63
D
317 319Right-handed 310
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There are 9 sheets in PDB entry 1OLP. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, CA, CB, A, DB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 310first strand
Strand 2
A
257 264anti-parallel
Strand 3
A
340 347anti-parallel
Strand 4
A
350 356anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 291first strand
Strand 2
A
275 282anti-parallel
Strand 3
A
321 329anti-parallel
Strand 4
A
365 368anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
361 362anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 310first strand
Strand 2
B
257 264anti-parallel
Strand 3
B
340 347anti-parallel
Strand 4
B
350 356anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 291first strand
Strand 2
B
275 282anti-parallel
Strand 3
B
321 329anti-parallel
Strand 4
B
365 368anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
304 310first strand
Strand 2
C
257 264anti-parallel
Strand 3
C
340 347anti-parallel
Strand 4
C
350 356anti-parallel
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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
287 291first strand
Strand 2
C
275 282anti-parallel
Strand 3
C
321 329anti-parallel
Strand 4
C
365 368anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
304 310first strand
Strand 2
D
257 264anti-parallel
Strand 3
D
340 347anti-parallel
Strand 4
D
350 356anti-parallel
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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
287 291first strand
Strand 2
D
275 282anti-parallel
Strand 3
D
321 329anti-parallel
Strand 4
D
365 368anti-parallel
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