Analysis of interatomic Contacts of Structural Units in PDB entry:
1OLT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OLT entry

There is 1 chain in PDB entry 1OLT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4LEU 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 1OLT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 32Right-handed 310
Helix 2
2
A
37 46Right-handed alpha
Helix 3
3
A
79 97Right-handed alpha
Helix 4
4
A
98 101Right-handed 310
Helix 5
5
A
114 118Right-handed 310
Helix 6
6
A
119 134Right-handed alpha
Helix 7
7
A
153 162Right-handed alpha
Helix 8
8
A
175 183Right-handed alpha
Helix 9
9
A
187 201Right-handed alpha
Helix 10
10
A
218 233Right-handed alpha
Helix 11
11
A
249 255Right-handed 310
Helix 12
12
A
256 260Right-handed 310
Helix 13
13
A
262 280Right-handed alpha
Helix 14
14
A
295 304Right-handed alpha
Helix 15
15
A
342 354Right-handed alpha
Helix 16
16
A
364 381Right-handed alpha
Helix 17
17
A
385 392Right-handed alpha
Helix 18
18
A
395 400Right-handed alpha
Helix 19
19
A
400 413Right-handed alpha
Helix 20
20
A
429 431Right-handed 310
Helix 21
21
A
432 439Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 1OLT. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 286first strand
Strand 2
A
289 291anti-parallel
Strand 3
A
236 241anti-parallel
Strand 4
A
207 212parallel
Strand 5
A
166 172parallel
Strand 6
A
136 146parallel
Strand 7
A
105 112parallel
Strand 8
A
53 59parallel
Strand 9
A
320 324parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
74 75parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
A
313 314anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 332first strand
Strand 2
A
335 339anti-parallel
Strand 3
A
357 362anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 384first strand
Strand 2
A
422 425anti-parallel
Strand 3
A
416 418anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il