Analysis of interatomic Contacts of Structural Units in PDB entry:
1OMV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OMV entry

There is 1 chain in PDB entry 1OMV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7LEU 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1OMV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 18Right-handed alpha
Helix 2
2
A
19 21Right-handed 310
Helix 3
3
A
24 39Right-handed alpha
Helix 4
4
A
46 57Right-handed alpha
Helix 5
5
A
62 72Right-handed alpha
Helix 6
6
A
83 95Right-handed alpha
Helix 7
7
A
97 100Right-handed 310
Helix 8
8
A
101 110Right-handed alpha
Helix 9
9
A
118 131Right-handed alpha
Helix 10
10
A
134 139Right-handed alpha
Helix 11
11
A
140 141Right-handed 310
Helix 12
12
A
142 146Right-handed 310
Helix 13
13
A
147 159Right-handed alpha
Helix 14
14
A
168 179Right-handed alpha
Helix 15
15
A
179 187Right-handed alpha
Helix 16
16
A
189 197Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1OMV.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
80 82anti-parallel
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