Analysis of interatomic Contacts of Structural Units in PDB entry:
1OMX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OMX entry

There are 2 chains in PDB entry 1OMX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 63LYS 327
B
 ALA 63LYS 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1OMX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
2
A
108 115Right-handed alpha
Helix 2
4
A
157 171Right-handed alpha
Helix 3
5
A
221 229Right-handed alpha
Helix 4
6
A
231 241Right-handed alpha
Helix 5
7
A
244 258Right-handed alpha
Helix 6
8
A
289 305Right-handed alpha
Helix 7
9
B
76 88Right-handed alpha
Helix 8
10
B
108 115Right-handed alpha
Helix 9
11
B
157 171Right-handed alpha
Helix 10
12
B
221 229Right-handed alpha
Helix 11
14
B
244 258Right-handed alpha
Helix 12
15
B
289 304Right-handed alpha
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There are 5 sheets in PDB entry 1OMX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 16 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 127first strand
Strand 2
A
93 101parallel
Strand 3
A
67 73parallel
Strand 4
A
146 151parallel
Strand 5
A
217 220anti-parallel
Strand 6
A
175 177anti-parallel
Strand 7
A
262 265parallel
Strand 8
A
314 318parallel
Strand 9
B
314 318anti-parallel
Strand 10
B
262 265parallel
Strand 11
B
175 177parallel
Strand 12
B
216 220anti-parallel
Strand 13
B
146 150anti-parallel
Strand 14
B
67 73parallel
Strand 15
B
93 100parallel
Strand 16
B
122 126parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
270 271anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 194first strand
Strand 2
A
180 187anti-parallel
Strand 3
A
211 212anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 156first strand
Strand 2
B
270 272anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 194first strand
Strand 2
B
180 187anti-parallel
Strand 3
B
211 212anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il