Analysis of interatomic Contacts of Structural Units in PDB entry:
1OQ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OQ9 entry

There is 1 chain in PDB entry 1OQ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 18LEU 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1OQ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 42Right-handed alpha
Helix 2
2
A
43 51Right-handed alpha
Helix 3
3
A
57 61Right-handed 310
Helix 4
4
A
63 68Right-handed 310
Helix 5
5
A
75 89Right-handed alpha
Helix 6
6
A
91 107Right-handed alpha
Helix 7
7
A
107 116Right-handed alpha
Helix 8
8
A
130 158Right-handed alpha
Helix 9
9
A
161 176Right-handed alpha
Helix 10
10
A
184 213Right-handed alpha
Helix 11
11
A
215 247Right-handed alpha
Helix 12
12
A
247 262Right-handed alpha
Helix 13
13
A
277 289Right-handed alpha
Helix 14
14
A
293 308Right-handed alpha
Helix 15
15
A
317 336Right-handed alpha
Helix 16
16
A
354 357Right-handed 310
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There is 1 sheet ( A) in PDB entry 1OQ9.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 352first strand
Strand 2
A
360 362anti-parallel
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