Analysis of interatomic Contacts of Structural Units in PDB entry:
1OR9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1OR9 entry

There are 18 chains in PDB entry 1OR9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 2	SER 199
B	THR 2	SER 199
C	THR 2	SER 199
D	THR 2	SER 199
E	THR 2	SER 199
F	THR 2	SER 199
G	THR 2	SER 199
H	THR 2	SER 199
I	THR 2	SER 199
J	THR 2	SER 199
K	THR 2	SER 199
L	THR 2	SER 199
M	THR 2	SER 199
N	THR 2	SER 199
O	THR 2	SER 199
P	THR 2	SER 199
Q	THR 2	SER 199
R	THR 2	SER 199

There are162 helices in PDB entry 1OR9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	2	52	Right-handed alpha
Helix 2	2	A	53	55	Right-handed 310
Helix 3	3	A	62	76	Right-handed alpha
Helix 4	4	A	80	85	Right-handed alpha
Helix 5	5	A	116	128	Right-handed alpha
Helix 6	6	A	129	131	Right-handed 310
Helix 7	7	A	143	148	Right-handed alpha
Helix 8	8	A	156	160	Right-handed 310
Helix 9	9	A	178	185	Right-handed alpha
Helix 10	10	B	2	52	Right-handed alpha
Helix 11	11	B	53	55	Right-handed 310
Helix 12	12	B	62	76	Right-handed alpha
Helix 13	13	B	80	85	Right-handed alpha
Helix 14	14	B	116	128	Right-handed alpha
Helix 15	15	B	129	131	Right-handed 310
Helix 16	16	B	143	148	Right-handed alpha
Helix 17	17	B	156	160	Right-handed 310
Helix 18	18	B	178	185	Right-handed alpha
Helix 19	19	C	2	52	Right-handed alpha
Helix 20	20	C	53	55	Right-handed 310
Helix 21	21	C	62	76	Right-handed alpha
Helix 22	22	C	80	85	Right-handed alpha
Helix 23	23	C	116	128	Right-handed alpha
Helix 24	24	C	129	131	Right-handed 310
Helix 25	25	C	143	148	Right-handed alpha
Helix 26	26	C	156	160	Right-handed 310
Helix 27	27	C	178	185	Right-handed alpha
Helix 28	28	D	2	52	Right-handed alpha
Helix 29	29	D	53	55	Right-handed 310
Helix 30	30	D	62	76	Right-handed alpha
Helix 31	31	D	80	85	Right-handed alpha
Helix 32	32	D	116	128	Right-handed alpha
Helix 33	33	D	129	131	Right-handed 310
Helix 34	34	D	143	148	Right-handed alpha
Helix 35	35	D	156	160	Right-handed 310
Helix 36	36	D	178	185	Right-handed alpha
Helix 37	37	E	2	52	Right-handed alpha
Helix 38	38	E	53	55	Right-handed 310
Helix 39	39	E	62	76	Right-handed alpha
Helix 40	40	E	80	85	Right-handed alpha
Helix 41	41	E	116	128	Right-handed alpha
Helix 42	42	E	129	131	Right-handed 310
Helix 43	43	E	143	148	Right-handed alpha
Helix 44	44	E	156	160	Right-handed 310
Helix 45	45	E	178	185	Right-handed alpha
Helix 46	46	F	2	52	Right-handed alpha
Helix 47	47	F	53	55	Right-handed 310
Helix 48	48	F	62	76	Right-handed alpha
Helix 49	49	F	80	85	Right-handed alpha
Helix 50	50	F	116	128	Right-handed alpha
Helix 51	51	F	129	131	Right-handed 310
Helix 52	52	F	143	148	Right-handed alpha
Helix 53	53	F	156	160	Right-handed 310
Helix 54	54	F	178	185	Right-handed alpha
Helix 55	55	G	2	52	Right-handed alpha
Helix 56	56	G	53	55	Right-handed 310
Helix 57	57	G	62	76	Right-handed alpha
Helix 58	58	G	80	85	Right-handed alpha
Helix 59	59	G	116	128	Right-handed alpha
Helix 60	60	G	129	131	Right-handed 310
Helix 61	61	G	143	148	Right-handed alpha
Helix 62	62	G	156	160	Right-handed 310
Helix 63	63	G	178	185	Right-handed alpha
Helix 64	64	H	2	52	Right-handed alpha
Helix 65	65	H	53	55	Right-handed 310
Helix 66	66	H	62	76	Right-handed alpha
Helix 67	67	H	80	85	Right-handed alpha
Helix 68	68	H	116	128	Right-handed alpha
Helix 69	69	H	129	131	Right-handed 310
Helix 70	70	H	143	148	Right-handed alpha
Helix 71	71	H	156	160	Right-handed 310
Helix 72	72	H	178	185	Right-handed alpha
Helix 73	73	I	2	52	Right-handed alpha
Helix 74	74	I	53	55	Right-handed 310
Helix 75	75	I	62	76	Right-handed alpha
Helix 76	76	I	80	85	Right-handed alpha
Helix 77	77	I	116	128	Right-handed alpha
Helix 78	78	I	129	131	Right-handed 310
Helix 79	79	I	143	148	Right-handed alpha
Helix 80	80	I	156	160	Right-handed 310
Helix 81	81	I	178	185	Right-handed alpha
Helix 82	82	J	2	52	Right-handed alpha
Helix 83	83	J	53	55	Right-handed 310
Helix 84	84	J	62	76	Right-handed alpha
Helix 85	85	J	80	85	Right-handed alpha
Helix 86	86	J	116	128	Right-handed alpha
Helix 87	87	J	129	131	Right-handed 310
Helix 88	88	J	143	148	Right-handed alpha
Helix 89	89	J	156	160	Right-handed 310
Helix 90	90	J	178	185	Right-handed alpha
Helix 91	91	K	2	52	Right-handed alpha
Helix 92	92	K	53	55	Right-handed 310
Helix 93	93	K	62	76	Right-handed alpha
Helix 94	94	K	80	85	Right-handed alpha
Helix 95	95	K	116	128	Right-handed alpha
Helix 96	96	K	129	131	Right-handed 310
Helix 97	97	K	143	148	Right-handed alpha
Helix 98	98	K	156	160	Right-handed 310
Helix 99	99	K	178	185	Right-handed alpha
Helix 100	100	L	2	52	Right-handed alpha
Helix 101	101	L	53	55	Right-handed 310
Helix 102	102	L	62	76	Right-handed alpha
Helix 103	103	L	80	85	Right-handed alpha
Helix 104	104	L	116	128	Right-handed alpha
Helix 105	105	L	129	131	Right-handed 310
Helix 106	106	L	143	148	Right-handed alpha
Helix 107	107	L	156	160	Right-handed 310
Helix 108	108	L	178	185	Right-handed alpha
Helix 109	109	M	2	52	Right-handed alpha
Helix 110	110	M	53	55	Right-handed 310
Helix 111	111	M	62	76	Right-handed alpha
Helix 112	112	M	80	85	Right-handed alpha
Helix 113	113	M	116	128	Right-handed alpha
Helix 114	114	M	129	131	Right-handed 310
Helix 115	115	M	143	148	Right-handed alpha
Helix 116	116	M	156	160	Right-handed 310
Helix 117	117	M	178	185	Right-handed alpha
Helix 118	118	N	2	52	Right-handed alpha
Helix 119	119	N	53	55	Right-handed 310
Helix 120	120	N	62	76	Right-handed alpha
Helix 121	121	N	80	85	Right-handed alpha
Helix 122	122	N	116	128	Right-handed alpha
Helix 123	123	N	129	131	Right-handed 310
Helix 124	124	N	143	148	Right-handed alpha
Helix 125	125	N	156	160	Right-handed 310
Helix 126	126	N	178	185	Right-handed alpha
Helix 127	127	O	2	52	Right-handed alpha
Helix 128	128	O	53	55	Right-handed 310
Helix 129	129	O	62	76	Right-handed alpha
Helix 130	130	O	80	85	Right-handed alpha
Helix 131	131	O	116	128	Right-handed alpha
Helix 132	132	O	129	131	Right-handed 310
Helix 133	133	O	143	148	Right-handed alpha
Helix 134	134	O	156	160	Right-handed 310
Helix 135	135	O	178	185	Right-handed alpha
Helix 136	136	P	2	52	Right-handed alpha
Helix 137	137	P	53	55	Right-handed 310
Helix 138	138	P	62	76	Right-handed alpha
Helix 139	139	P	80	85	Right-handed alpha
Helix 140	140	P	116	128	Right-handed alpha
Helix 141	141	P	129	131	Right-handed 310
Helix 142	142	P	143	148	Right-handed alpha
Helix 143	143	P	156	160	Right-handed 310
Helix 144	144	P	178	185	Right-handed alpha
Helix 145	145	Q	2	52	Right-handed alpha
Helix 146	146	Q	53	55	Right-handed 310
Helix 147	147	Q	62	76	Right-handed alpha
Helix 148	148	Q	80	85	Right-handed alpha
Helix 149	149	Q	116	128	Right-handed alpha
Helix 150	150	Q	129	131	Right-handed 310
Helix 151	151	Q	143	148	Right-handed alpha
Helix 152	152	Q	156	160	Right-handed 310
Helix 153	153	Q	178	185	Right-handed alpha
Helix 154	154	R	2	52	Right-handed alpha
Helix 155	155	R	53	55	Right-handed 310
Helix 156	156	R	62	76	Right-handed alpha
Helix 157	157	R	80	85	Right-handed alpha
Helix 158	158	R	116	128	Right-handed alpha
Helix 159	159	R	129	131	Right-handed 310
Helix 160	160	R	143	148	Right-handed alpha
Helix 161	161	R	156	160	Right-handed 310
Helix 162	162	R	178	185	Right-handed alpha

There are 18 sheets in PDB entry 1OR9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	100	first strand
Strand 2	A	103	115	anti-parallel
Strand 3	A	192	198	anti-parallel
Strand 4	A	133	138	anti-parallel
Strand 5	A	162	165	anti-parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	100	first strand
Strand 2	B	103	115	anti-parallel
Strand 3	B	192	198	anti-parallel
Strand 4	B	133	138	anti-parallel
Strand 5	B	162	165	anti-parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	100	first strand
Strand 2	C	103	115	anti-parallel
Strand 3	C	192	198	anti-parallel
Strand 4	C	133	138	anti-parallel
Strand 5	C	162	165	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	100	first strand
Strand 2	D	103	115	anti-parallel
Strand 3	D	192	198	anti-parallel
Strand 4	D	133	138	anti-parallel
Strand 5	D	162	165	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	94	100	first strand
Strand 2	E	103	115	anti-parallel
Strand 3	E	192	198	anti-parallel
Strand 4	E	133	138	anti-parallel
Strand 5	E	162	165	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	94	100	first strand
Strand 2	F	103	115	anti-parallel
Strand 3	F	192	198	anti-parallel
Strand 4	F	133	138	anti-parallel
Strand 5	F	162	165	anti-parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	94	100	first strand
Strand 2	G	103	115	anti-parallel
Strand 3	G	192	198	anti-parallel
Strand 4	G	133	138	anti-parallel
Strand 5	G	162	165	anti-parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	94	100	first strand
Strand 2	H	103	115	anti-parallel
Strand 3	H	192	198	anti-parallel
Strand 4	H	133	138	anti-parallel
Strand 5	H	162	165	anti-parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	94	100	first strand
Strand 2	I	103	115	anti-parallel
Strand 3	I	192	198	anti-parallel
Strand 4	I	133	138	anti-parallel
Strand 5	I	162	165	anti-parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	94	100	first strand
Strand 2	J	103	115	anti-parallel
Strand 3	J	192	198	anti-parallel
Strand 4	J	133	138	anti-parallel
Strand 5	J	162	165	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	94	100	first strand
Strand 2	K	103	115	anti-parallel
Strand 3	K	192	198	anti-parallel
Strand 4	K	133	138	anti-parallel
Strand 5	K	162	165	anti-parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	94	100	first strand
Strand 2	L	103	115	anti-parallel
Strand 3	L	192	198	anti-parallel
Strand 4	L	133	138	anti-parallel
Strand 5	L	162	165	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	94	100	first strand
Strand 2	M	103	115	anti-parallel
Strand 3	M	192	198	anti-parallel
Strand 4	M	133	138	anti-parallel
Strand 5	M	162	165	anti-parallel

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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	94	100	first strand
Strand 2	N	103	115	anti-parallel
Strand 3	N	192	198	anti-parallel
Strand 4	N	133	138	anti-parallel
Strand 5	N	162	165	anti-parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	94	100	first strand
Strand 2	O	103	115	anti-parallel
Strand 3	O	192	198	anti-parallel
Strand 4	O	133	138	anti-parallel
Strand 5	O	162	165	anti-parallel

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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	94	100	first strand
Strand 2	P	103	115	anti-parallel
Strand 3	P	192	198	anti-parallel
Strand 4	P	133	138	anti-parallel
Strand 5	P	162	165	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	94	100	first strand
Strand 2	Q	103	115	anti-parallel
Strand 3	Q	192	198	anti-parallel
Strand 4	Q	133	138	anti-parallel
Strand 5	Q	162	165	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	94	100	first strand
Strand 2	R	103	115	anti-parallel
Strand 3	R	192	198	anti-parallel
Strand 4	R	133	138	anti-parallel
Strand 5	R	162	165	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1OR9

Analysis of interatomic Contacts of Structural Units in PDB entry:
1OR9