Analysis of interatomic Contacts of Structural Units in PDB entry:
1OSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OSJ entry

There are 2 chains in PDB entry 1OSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 345
B
 MET 1ALA 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 1OSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 30Right-handed alpha
Helix 2
2
A
42 49Right-handed 310
Helix 3
3
A
55 63Right-handed alpha
Helix 4
4
A
75 77Right-handed 310
Helix 5
5
A
82 84Right-handed 310
Helix 6
6
A
86 96Right-handed alpha
Helix 7
7
A
113 115Right-handed 310
Helix 8
8
A
120 123Right-handed alpha
Helix 9
9
A
159 175Right-handed alpha
Helix 10
10
A
190 205Right-handed alpha
Helix 11
11
A
216 225Right-handed alpha
Helix 12
12
A
227 229Right-handed 310
Helix 13
13
A
237 251Right-handed alpha
Helix 14
14
A
254 256Right-handed 310
Helix 15
15
A
277 279Right-handed 310
Helix 16
16
A
288 300Right-handed alpha
Helix 17
17
A
305 321Right-handed alpha
Helix 18
18
A
325 327Right-handed 310
Helix 19
19
A
333 343Right-handed alpha
Helix 20
20
B
10 30Right-handed 310
Helix 21
21
B
42 49Right-handed 310
Helix 22
22
B
55 63Right-handed alpha
Helix 23
23
B
75 77Right-handed 310
Helix 24
24
B
82 84Right-handed 310
Helix 25
25
B
86 97Right-handed alpha
Helix 26
26
B
120 123Right-handed alpha
Helix 27
27
B
159 175Right-handed alpha
Helix 28
28
B
190 205Right-handed alpha
Helix 29
29
B
216 225Right-handed alpha
Helix 30
30
B
227 229Right-handed 310
Helix 31
31
B
237 249Right-handed alpha
Helix 32
32
B
254 256Right-handed 310
Helix 33
33
B
277 279Right-handed 310
Helix 34
34
B
288 300Right-handed alpha
Helix 35
35
B
305 321Right-handed alpha
Helix 36
36
B
325 327Right-handed 310
Helix 37
37
B
333 343Right-handed alpha
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There are 3 sheets in PDB entry 1OSJ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
2 6parallel
Strand 3
A
66 69parallel
Strand 4
A
267 271parallel
Strand 5
A
258 263anti-parallel
Strand 6
A
99 107anti-parallel
Strand 7
A
127 133anti-parallel
Strand 8
A
232 235parallel
Strand 9
A
179 184parallel
Strand 10
A
210 215parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 158first strand
Strand 2
B
150 158anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 38first strand
Strand 2
B
2 6parallel
Strand 3
B
66 69parallel
Strand 4
B
267 271parallel
Strand 5
B
258 263anti-parallel
Strand 6
B
99 107anti-parallel
Strand 7
B
127 133anti-parallel
Strand 8
B
232 235parallel
Strand 9
B
179 184parallel
Strand 10
B
210 215parallel
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