Analysis of interatomic Contacts of Structural Units in PDB entry:
1OTH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OTH entry

There is 1 chain in PDB entry 1OTH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 34PHE 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1OTH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 47Right-handed 310
Helix 2
2
A
50 68Right-handed alpha
Helix 3
3
A
92 103Right-handed alpha
Helix 4
4
A
124 134Right-handed alpha
Helix 5
5
A
145 154Right-handed alpha
Helix 6
6
A
169 183Right-handed alpha
Helix 7
7
A
199 205Right-handed alpha
Helix 8
8
A
209 211Right-handed 310
Helix 9
9
A
227 240Right-handed alpha
Helix 10
10
A
250 254Right-handed alpha
Helix 11
11
A
271 280Right-handed 310
Helix 12
12
A
288 293Right-handed alpha
Helix 13
13
A
313 316Right-handed alpha
Helix 14
14
A
323 342Right-handed alpha
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There are 2 sheets in PDB entry 1OTH. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 112first strand
Strand 2
A
81 86parallel
Strand 3
A
137 141parallel
Strand 4
A
158 161parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 302first strand
Strand 2
A
259 262parallel
Strand 3
A
190 194parallel
Strand 4
A
214 218parallel
Strand 5
A
244 247parallel
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