Analysis of interatomic Contacts of Structural Units in PDB entry:
1OTV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OTV entry

There are 2 chains in PDB entry 1OTV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2HIS 255
B
 LEU 2HIS 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1OTV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 23Right-handed alpha
Helix 2
3
A
29 35Right-handed alpha
Helix 3
4
A
39 67Right-handed alpha
Helix 4
5
A
70 86Right-handed alpha
Helix 5
6
A
92 104Right-handed alpha
Helix 6
7
A
107 113Right-handed alpha
Helix 7
8
A
118 134Right-handed alpha
Helix 8
9
A
138 143Right-handed alpha
Helix 9
10
A
144 150Right-handed 310
Helix 10
11
A
169 182Right-handed alpha
Helix 11
12
A
188 198Right-handed alpha
Helix 12
13
A
200 230Right-handed alpha
Helix 13
14
B
8 23Right-handed alpha
Helix 14
16
B
29 35Right-handed alpha
Helix 15
17
B
39 67Right-handed alpha
Helix 16
18
B
70 86Right-handed alpha
Helix 17
19
B
92 104Right-handed alpha
Helix 18
20
B
107 113Right-handed alpha
Helix 19
21
B
118 134Right-handed alpha
Helix 20
22
B
138 143Right-handed alpha
Helix 21
23
B
144 150Right-handed 310
Helix 22
24
B
169 182Right-handed alpha
Helix 23
25
B
188 198Right-handed alpha
Helix 24
26
B
200 230Right-handed alpha
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There are no sheets in PDB entry 1OTV
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il