Analysis of interatomic Contacts of Structural Units in PDB entry:
1OTW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OTW entry

There are 2 chains in PDB entry 1OTW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0HIS 254
B
 LEU 2HIS 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1OTW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 23Right-handed alpha
Helix 2
3
A
29 35Right-handed alpha
Helix 3
4
A
39 67Right-handed alpha
Helix 4
5
A
70 86Right-handed alpha
Helix 5
6
A
92 104Right-handed alpha
Helix 6
7
A
107 113Right-handed alpha
Helix 7
8
A
118 134Right-handed alpha
Helix 8
9
A
138 143Right-handed alpha
Helix 9
10
A
144 148Right-handed 310
Helix 10
11
A
149 165Right-handed alpha
Helix 11
12
A
169 172Right-handed 310
Helix 12
13
A
173 198Right-handed alpha
Helix 13
14
A
200 230Right-handed alpha
Helix 14
15
B
8 23Right-handed alpha
Helix 15
17
B
29 35Right-handed alpha
Helix 16
18
B
39 55Right-handed alpha
Helix 17
19
B
56 67Right-handed alpha
Helix 18
20
B
70 78Right-handed alpha
Helix 19
21
B
78 86Right-handed alpha
Helix 20
22
B
94 103Right-handed alpha
Helix 21
23
B
108 113Right-handed alpha
Helix 22
24
B
118 134Right-handed alpha
Helix 23
25
B
138 143Right-handed alpha
Helix 24
26
B
144 148Right-handed 310
Helix 25
27
B
149 165Right-handed alpha
Helix 26
28
B
169 172Right-handed 310
Helix 27
29
B
173 198Right-handed alpha
Helix 28
30
B
200 230Right-handed alpha
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There are no sheets in PDB entry 1OTW
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il