Analysis of interatomic Contacts of Structural Units in PDB entry:
1OVL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OVL entry

There are 6 chains in PDB entry 1OVL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 363PHE 598
B
 SER 363PHE 598
C
 SER 363PHE 598
D
 SER 363PHE 598
E
 ARG 334PHE 598
F
 SER 363PHE 598
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 1OVL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
363 375Right-handed alpha
Helix 2
2
A
399 423Right-handed alpha
Helix 3
3
A
426 430Right-handed 310
Helix 4
4
A
431 455Right-handed alpha
Helix 5
5
A
472 476Right-handed alpha
Helix 6
6
A
477 478Right-handed 310
Helix 7
7
A
479 480Right-handed 310
Helix 8
8
A
481 495Right-handed alpha
Helix 9
9
A
499 512Right-handed alpha
Helix 10
10
A
520 541Right-handed alpha
Helix 11
11
A
542 544Right-handed 310
Helix 12
12
A
550 580Right-handed alpha
Helix 13
13
A
585 596Right-handed alpha
Helix 14
14
B
363 375Right-handed alpha
Helix 15
15
B
391 395Right-handed 310
Helix 16
16
B
398 413Right-handed alpha
Helix 17
17
B
413 423Right-handed alpha
Helix 18
18
B
426 430Right-handed 310
Helix 19
19
B
431 455Right-handed alpha
Helix 20
20
B
456 459Right-handed 310
Helix 21
21
B
472 480Right-handed alpha
Helix 22
22
B
481 496Right-handed alpha
Helix 23
23
B
499 512Right-handed alpha
Helix 24
24
B
520 542Right-handed alpha
Helix 25
25
B
548 557Right-handed alpha
Helix 26
26
B
557 580Right-handed alpha
Helix 27
27
B
585 596Right-handed alpha
Helix 28
28
C
363 375Right-handed alpha
Helix 29
29
C
398 423Right-handed alpha
Helix 30
30
C
426 430Right-handed 310
Helix 31
31
C
431 455Right-handed alpha
Helix 32
32
C
472 476Right-handed alpha
Helix 33
33
C
481 496Right-handed alpha
Helix 34
34
C
499 512Right-handed alpha
Helix 35
35
C
520 542Right-handed alpha
Helix 36
36
C
551 557Right-handed alpha
Helix 37
37
C
557 580Right-handed alpha
Helix 38
38
C
585 596Right-handed alpha
Helix 39
39
D
363 375Right-handed alpha
Helix 40
40
D
399 423Right-handed alpha
Helix 41
41
D
426 430Right-handed 310
Helix 42
42
D
431 455Right-handed alpha
Helix 43
43
D
472 476Right-handed alpha
Helix 44
44
D
481 496Right-handed alpha
Helix 45
45
D
499 512Right-handed alpha
Helix 46
46
D
520 543Right-handed alpha
Helix 47
47
D
544 548Right-handed 310
Helix 48
48
D
550 557Right-handed alpha
Helix 49
49
D
557 580Right-handed alpha
Helix 50
50
D
585 596Right-handed alpha
Helix 51
51
E
337 342Right-handed alpha
Helix 52
52
E
363 375Right-handed alpha
Helix 53
53
E
390 394Right-handed 310
Helix 54
54
E
398 423Right-handed alpha
Helix 55
55
E
431 455Right-handed alpha
Helix 56
56
E
456 459Right-handed 310
Helix 57
57
E
472 479Right-handed alpha
Helix 58
58
E
481 495Right-handed alpha
Helix 59
59
E
499 512Right-handed alpha
Helix 60
60
E
520 542Right-handed alpha
Helix 61
61
E
548 580Right-handed alpha
Helix 62
62
E
585 596Right-handed alpha
Helix 63
63
F
363 375Right-handed alpha
Helix 64
64
F
399 423Right-handed alpha
Helix 65
65
F
431 455Right-handed alpha
Helix 66
66
F
472 480Right-handed alpha
Helix 67
67
F
481 495Right-handed alpha
Helix 68
68
F
499 512Right-handed alpha
Helix 69
69
F
520 542Right-handed alpha
Helix 70
70
F
550 580Right-handed alpha
Helix 71
71
F
585 596Right-handed alpha
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There are 6 sheets in PDB entry 1OVL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 463first strand
Strand 2
A
469 471anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
461 463first strand
Strand 2
B
469 471anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
461 463first strand
Strand 2
C
469 471anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
461 463first strand
Strand 2
D
469 471anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
461 463first strand
Strand 2
E
469 471anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
461 463first strand
Strand 2
F
469 471anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il