Analysis of interatomic Contacts of Structural Units in PDB entry:
1OVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OVT entry

There is 1 chain in PDB entry 1OVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5LYS 686
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1OVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
N1
A
13 28Right-handed alpha
Helix 2
N2
A
41 53Right-handed alpha
Helix 3
N3
A
60 68Right-handed alpha
Helix 4
N4
A
105 109Right-handed 310
Helix 5
N5
A
121 136Right-handed alpha
Helix 6
N6
A
147 156Right-handed 310
Helix 7
N6A
A
167 174Right-handed 310
Helix 8
N7
A
189 201Right-handed alpha
Helix 9
N8
A
211 217Right-handed alpha
Helix 10
N8A
A
220 223Right-handed 310
Helix 11
N9
A
259 275Right-handed 310
Helix 12
N10
A
315 321Right-handed alpha
Helix 13
N11
A
321 332Right-handed alpha
Helix 14
C1
A
351 365Right-handed alpha
Helix 15
C2
A
376 388Right-handed alpha
Helix 16
C3
A
395 405Right-handed alpha
Helix 17
C4
A
444 448Right-handed 310
Helix 18
C5
A
460 476Right-handed alpha
Helix 19
C6
A
480 483Right-handed 310
Helix 20
C6A
A
496 499Right-handed 310
Helix 21
C7
A
523 534Right-handed alpha
Helix 22
C8
A
543 549Right-handed alpha
Helix 23
C9
A
600 616Right-handed alpha
Helix 24
C10
A
652 658Right-handed alpha
Helix 25
C11
A
658 669Right-handed alpha
Helix 26
C12
A
674 686Right-handed alpha
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There are 6 sheets in PDB entry 1OVT. Click on sheet of interest to get list of strands forming it: S1A, S1B, S1C, S2A, S2B, S2C,

There are 6 strands in S1A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 39first strand
Strand 2
A
6 11parallel
Strand 3
A
54 59parallel
Strand 4
A
244 255anti-parallel
Strand 5
A
74 82anti-parallel
Strand 6
A
305 310anti-parallel
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There are 3 strands in S1B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 210first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
244 255anti-parallel
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There are 6 strands in S1C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 161first strand
Strand 2
A
112 116parallel
Strand 3
A
204 210parallel
Strand 4
A
91 100anti-parallel
Strand 5
A
223 228anti-parallel
Strand 6
A
232 234anti-parallel
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There are 6 strands in S2A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 374first strand
Strand 2
A
344 351parallel
Strand 3
A
389 394parallel
Strand 4
A
586 597anti-parallel
Strand 5
A
407 415anti-parallel
Strand 6
A
642 647anti-parallel
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There are 3 strands in S2B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 542first strand
Strand 2
A
430 439anti-parallel
Strand 3
A
586 597anti-parallel
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There are 6 strands in S2C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
485 489first strand
Strand 2
A
451 455parallel
Strand 3
A
536 542parallel
Strand 4
A
430 439anti-parallel
Strand 5
A
565 570anti-parallel
Strand 6
A
574 576anti-parallel
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