Analysis of interatomic Contacts of Structural Units in PDB entry:
1OVZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OVZ entry

There are 2 chains in PDB entry 1OVZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6ASP 198
B
 GLU 2VAL 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 1OVZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
70 74Right-handed 310
Helix 2
2
A
163 167Right-handed 310
Helix 3
3
B
70 74Right-handed 310
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There are 8 sheets in PDB entry 1OVZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
24 28anti-parallel
Strand 3
A
63 66anti-parallel
Strand 4
A
52 53anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
36 42anti-parallel
Strand 3
A
75 82anti-parallel
Strand 4
A
88 90anti-parallel
Strand 5
A
75 82anti-parallel
Strand 6
A
94 99anti-parallel
Strand 7
A
182 183parallel
Strand 8
A
94 99parallel
Strand 9
A
17 19parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 109first strand
Strand 2
A
122 126anti-parallel
Strand 3
A
156 158anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
190 194parallel
Strand 3
A
168 173anti-parallel
Strand 4
A
135 139anti-parallel
Strand 5
A
149 150anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
24 28anti-parallel
Strand 3
B
63 66anti-parallel
Strand 4
B
52 54anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
36 42anti-parallel
Strand 3
B
75 82anti-parallel
Strand 4
B
88 90anti-parallel
Strand 5
B
75 82anti-parallel
Strand 6
B
94 99anti-parallel
Strand 7
B
17 19parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 108first strand
Strand 2
B
124 125anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
135 139anti-parallel
Strand 3
B
168 173anti-parallel
Strand 4
B
190 192anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il