Analysis of interatomic Contacts of Structural Units in PDB entry:
1OXK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OXK entry

There are 12 chains in PDB entry 1OXK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 167
B
 SER 1087GLN 1214
C
 SER 2LEU 167
D
 SER 1087GLN 1214
E
 SER 2LEU 167
F
 SER 1087GLN 1214
G
 SER 2LEU 167
H
 SER 1087GLN 1214
I
 SER 2LEU 167
J
 SER 1087GLN 1214
K
 SER 2LEU 167
L
 SER 1087GLN 1214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 1OXK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 19Right-handed alpha
Helix 2
2
A
26 52Right-handed alpha
Helix 3
3
A
55 73Right-handed alpha
Helix 4
4
A
75 90Right-handed alpha
Helix 5
5
A
98 104Right-handed alpha
Helix 6
6
A
108 113Right-handed 310
Helix 7
7
A
133 164Right-handed alpha
Helix 8
8
B
1096 1110Right-handed alpha
Helix 9
9
B
1120 1134Right-handed alpha
Helix 10
10
B
1151 1164Right-handed alpha
Helix 11
11
B
1177 1188Right-handed alpha
Helix 12
12
B
1198 1210Right-handed alpha
Helix 13
13
C
10 19Right-handed alpha
Helix 14
14
C
26 52Right-handed alpha
Helix 15
15
C
55 73Right-handed alpha
Helix 16
16
C
75 90Right-handed alpha
Helix 17
17
C
98 104Right-handed alpha
Helix 18
18
C
108 113Right-handed 310
Helix 19
19
C
133 164Right-handed alpha
Helix 20
20
D
1096 1110Right-handed alpha
Helix 21
21
D
1120 1134Right-handed alpha
Helix 22
22
D
1151 1164Right-handed alpha
Helix 23
23
D
1177 1187Right-handed alpha
Helix 24
24
D
1198 1210Right-handed alpha
Helix 25
25
E
10 19Right-handed alpha
Helix 26
26
E
26 52Right-handed alpha
Helix 27
27
E
55 73Right-handed alpha
Helix 28
28
E
75 90Right-handed alpha
Helix 29
29
E
98 104Right-handed alpha
Helix 30
30
E
108 113Right-handed 310
Helix 31
31
E
133 164Right-handed alpha
Helix 32
32
F
1096 1110Right-handed alpha
Helix 33
33
F
1120 1134Right-handed alpha
Helix 34
34
F
1151 1164Right-handed alpha
Helix 35
35
F
1177 1187Right-handed alpha
Helix 36
36
F
1198 1210Right-handed alpha
Helix 37
37
G
10 19Right-handed alpha
Helix 38
38
G
26 52Right-handed alpha
Helix 39
39
G
55 73Right-handed alpha
Helix 40
40
G
75 90Right-handed alpha
Helix 41
41
G
98 104Right-handed alpha
Helix 42
42
G
108 113Right-handed 310
Helix 43
43
G
133 164Right-handed alpha
Helix 44
44
H
1096 1110Right-handed alpha
Helix 45
45
H
1120 1134Right-handed alpha
Helix 46
46
H
1151 1164Right-handed alpha
Helix 47
47
H
1177 1187Right-handed alpha
Helix 48
48
H
1198 1210Right-handed alpha
Helix 49
49
I
10 19Right-handed alpha
Helix 50
50
I
26 52Right-handed alpha
Helix 51
51
I
55 73Right-handed alpha
Helix 52
52
I
75 90Right-handed alpha
Helix 53
53
I
98 104Right-handed alpha
Helix 54
54
I
108 113Right-handed 310
Helix 55
55
I
133 164Right-handed alpha
Helix 56
56
J
1096 1109Right-handed alpha
Helix 57
57
J
1120 1134Right-handed alpha
Helix 58
58
J
1151 1164Right-handed alpha
Helix 59
59
J
1177 1188Right-handed alpha
Helix 60
60
J
1198 1210Right-handed alpha
Helix 61
61
K
10 19Right-handed alpha
Helix 62
62
K
26 52Right-handed alpha
Helix 63
63
K
55 73Right-handed alpha
Helix 64
64
K
75 90Right-handed alpha
Helix 65
65
K
98 104Right-handed alpha
Helix 66
66
K
108 113Right-handed 310
Helix 67
67
K
133 164Right-handed alpha
Helix 68
68
L
1096 1110Right-handed alpha
Helix 69
69
L
1120 1134Right-handed alpha
Helix 70
70
L
1151 1164Right-handed alpha
Helix 71
71
L
1177 1187Right-handed alpha
Helix 72
72
L
1198 1210Right-handed alpha
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There are 6 sheets in PDB entry 1OXK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1115 1118first strand
Strand 2
B
1090 1093parallel
Strand 3
B
1140 1144parallel
Strand 4
B
1169 1173parallel
Strand 5
B
1191 1194parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1115 1118first strand
Strand 2
D
1090 1093parallel
Strand 3
D
1140 1144parallel
Strand 4
D
1169 1173parallel
Strand 5
D
1191 1194parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
1115 1118first strand
Strand 2
F
1090 1093parallel
Strand 3
F
1140 1144parallel
Strand 4
F
1169 1173parallel
Strand 5
F
1191 1194parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
1115 1118first strand
Strand 2
H
1090 1093parallel
Strand 3
H
1140 1144parallel
Strand 4
H
1169 1173parallel
Strand 5
H
1191 1194parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
1114 1118first strand
Strand 2
J
1089 1093parallel
Strand 3
J
1140 1144parallel
Strand 4
J
1169 1173parallel
Strand 5
J
1191 1194parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
1114 1118first strand
Strand 2
L
1089 1093parallel
Strand 3
L
1140 1144parallel
Strand 4
L
1169 1173parallel
Strand 5
L
1191 1194parallel
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