Analysis of interatomic Contacts of Structural Units in PDB entry:
1OXM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OXM entry

There are 2 chains in PDB entry 1OXM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 17GLY 212
B
 ARG 17GLY 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1OXM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 25Right-handed alpha
Helix 2
2
A
28 30Right-handed 310
Helix 3
3
A
49 63Right-handed alpha
Helix 4
4
A
82 85Right-handed 310
Helix 5
5
A
92 108Right-handed alpha
Helix 6
6
A
120 132Right-handed 310
Helix 7
7
A
135 140Right-handed alpha
Helix 8
8
A
164 166Right-handed 310
Helix 9
9
A
176 179Right-handed 310
Helix 10
10
A
186 189Right-handed 310
Helix 11
11
A
192 196Right-handed alpha
Helix 12
12
A
198 210Right-handed alpha
Helix 13
13
B
22 25Right-handed alpha
Helix 14
14
B
28 30Right-handed 310
Helix 15
15
B
49 63Right-handed alpha
Helix 16
16
B
82 85Right-handed 310
Helix 17
17
B
92 108Right-handed alpha
Helix 18
18
B
121 132Right-handed alpha
Helix 19
19
B
135 140Right-handed alpha
Helix 20
20
B
164 166Right-handed 310
Helix 21
21
B
176 179Right-handed 310
Helix 22
22
B
186 189Right-handed 310
Helix 23
23
B
192 196Right-handed alpha
Helix 24
24
B
198 210Right-handed alpha
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There are 2 sheets in PDB entry 1OXM. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
34 39parallel
Strand 3
A
113 119parallel
Strand 4
A
144 147parallel
Strand 5
A
167 170parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 72first strand
Strand 2
B
34 39parallel
Strand 3
B
113 119parallel
Strand 4
B
141 147parallel
Strand 5
B
167 170parallel
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