Analysis of interatomic Contacts of Structural Units in PDB entry:
1OY0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OY0 entry

There are 5 chains in PDB entry 1OY0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 18HIS 279
B
 ARG 18HIS 279
C
 ARG 18HIS 279
D
 ARG 18HIS 279
E
 ARG 18HIS 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 1OY0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 33Right-handed alpha
Helix 2
2
A
43 52Right-handed alpha
Helix 3
3
A
63 68Right-handed alpha
Helix 4
4
A
78 81Right-handed 310
Helix 5
5
A
82 93Right-handed alpha
Helix 6
6
A
110 124Right-handed alpha
Helix 7
7
A
135 137Right-handed 310
Helix 8
8
A
138 149Right-handed alpha
Helix 9
9
A
175 192Right-handed alpha
Helix 10
10
A
202 213Right-handed alpha
Helix 11
11
A
232 237Right-handed alpha
Helix 12
12
A
253 271Right-handed alpha
Helix 13
13
B
22 33Right-handed alpha
Helix 14
14
B
43 52Right-handed alpha
Helix 15
15
B
63 68Right-handed alpha
Helix 16
16
B
78 81Right-handed 310
Helix 17
17
B
82 93Right-handed alpha
Helix 18
18
B
110 124Right-handed alpha
Helix 19
19
B
135 137Right-handed 310
Helix 20
20
B
138 149Right-handed alpha
Helix 21
21
B
175 192Right-handed alpha
Helix 22
22
B
202 213Right-handed alpha
Helix 23
23
B
232 237Right-handed alpha
Helix 24
24
B
253 271Right-handed alpha
Helix 25
25
C
22 33Right-handed alpha
Helix 26
26
C
43 52Right-handed alpha
Helix 27
27
C
63 68Right-handed alpha
Helix 28
28
C
78 93Right-handed alpha
Helix 29
29
C
110 124Right-handed alpha
Helix 30
30
C
135 137Right-handed 310
Helix 31
31
C
138 149Right-handed alpha
Helix 32
32
C
175 192Right-handed alpha
Helix 33
33
C
202 213Right-handed alpha
Helix 34
34
C
232 237Right-handed alpha
Helix 35
35
C
253 271Right-handed alpha
Helix 36
36
D
22 33Right-handed alpha
Helix 37
37
D
43 52Right-handed alpha
Helix 38
38
D
63 68Right-handed alpha
Helix 39
39
D
78 81Right-handed 310
Helix 40
40
D
82 93Right-handed alpha
Helix 41
41
D
110 124Right-handed alpha
Helix 42
42
D
135 137Right-handed 310
Helix 43
43
D
138 149Right-handed alpha
Helix 44
44
D
175 192Right-handed alpha
Helix 45
45
D
202 213Right-handed alpha
Helix 46
46
D
232 237Right-handed alpha
Helix 47
47
D
253 271Right-handed alpha
Helix 48
48
E
22 33Right-handed alpha
Helix 49
49
E
43 52Right-handed alpha
Helix 50
50
E
63 68Right-handed alpha
Helix 51
51
E
78 81Right-handed 310
Helix 52
52
E
82 93Right-handed alpha
Helix 53
53
E
110 124Right-handed alpha
Helix 54
54
E
135 137Right-handed 310
Helix 55
55
E
138 149Right-handed alpha
Helix 56
56
E
175 192Right-handed alpha
Helix 57
57
E
202 213Right-handed alpha
Helix 58
58
E
232 237Right-handed alpha
Helix 59
59
E
253 271Right-handed alpha
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There are 5 sheets in PDB entry 1OY0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
57 60parallel
Strand 3
A
97 101parallel
Strand 4
A
129 133parallel
Strand 5
A
152 157parallel
Strand 6
A
195 199parallel
Strand 7
A
217 220parallel
Strand 8
A
228 231parallel
Strand 9
A
36 40parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
57 60parallel
Strand 3
B
97 101parallel
Strand 4
B
129 133parallel
Strand 5
B
152 157parallel
Strand 6
B
195 199parallel
Strand 7
B
217 220parallel
Strand 8
B
228 231parallel
Strand 9
B
36 40parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 40first strand
Strand 2
C
57 60parallel
Strand 3
C
97 101parallel
Strand 4
C
129 133parallel
Strand 5
C
152 157parallel
Strand 6
C
195 199parallel
Strand 7
C
217 220parallel
Strand 8
C
228 231parallel
Strand 9
C
36 40parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
36 40first strand
Strand 2
D
57 60parallel
Strand 3
D
97 101parallel
Strand 4
D
129 133parallel
Strand 5
D
152 157parallel
Strand 6
D
195 199parallel
Strand 7
D
217 220parallel
Strand 8
D
228 231parallel
Strand 9
D
36 40parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
36 40first strand
Strand 2
E
57 60parallel
Strand 3
E
97 101parallel
Strand 4
E
129 133parallel
Strand 5
E
152 157parallel
Strand 6
E
195 199parallel
Strand 7
E
217 220parallel
Strand 8
E
228 231parallel
Strand 9
E
36 40parallel
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