Analysis of interatomic Contacts of Structural Units in PDB entry:
1OYK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OYK entry

There are 2 chains in PDB entry 1OYK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 10HIS 223
B
 PRO 10HIS 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 1OYK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 21Right-handed alpha
Helix 2
2
A
21 30Right-handed alpha
Helix 3
3
A
31 39Right-handed alpha
Helix 4
4
A
43 68Right-handed alpha
Helix 5
5
A
74 78Right-handed 310
Helix 6
6
A
79 84Right-handed alpha
Helix 7
7
A
85 98Right-handed alpha
Helix 8
8
A
100 105Right-handed alpha
Helix 9
9
A
108 125Right-handed alpha
Helix 10
10
A
128 138Right-handed alpha
Helix 11
11
A
139 142Right-handed 310
Helix 12
12
A
144 156Right-handed alpha
Helix 13
13
A
164 168Right-handed 310
Helix 14
14
A
174 188Right-handed alpha
Helix 15
15
A
192 222Right-handed alpha
Helix 16
16
B
12 21Right-handed alpha
Helix 17
17
B
21 30Right-handed alpha
Helix 18
18
B
31 38Right-handed alpha
Helix 19
19
B
43 69Right-handed alpha
Helix 20
20
B
74 78Right-handed 310
Helix 21
21
B
79 84Right-handed alpha
Helix 22
22
B
85 98Right-handed alpha
Helix 23
23
B
100 105Right-handed alpha
Helix 24
24
B
108 125Right-handed alpha
Helix 25
25
B
128 142Right-handed alpha
Helix 26
26
B
143 155Right-handed alpha
Helix 27
27
B
164 168Right-handed 310
Helix 28
28
B
174 187Right-handed alpha
Helix 29
29
B
192 222Right-handed alpha
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There are no sheets in PDB entry 1OYK
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