Analysis of interatomic Contacts of Structural Units in PDB entry:
1OZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OZK entry

There is 1 chain in PDB entry 1OZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1MET 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1OZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 25Right-handed alpha
Helix 2
2
A
47 49Right-handed 310
Helix 3
3
A
50 55Right-handed alpha
Helix 4
4
A
61 65Right-handed 310
Helix 5
5
A
69 73Right-handed 310
Helix 6
6
A
141 162Right-handed alpha
Helix 7
7
A
178 203Right-handed alpha
Helix 8
8
A
224 238Right-handed alpha
Helix 9
9
A
279 284Right-handed alpha
Helix 10
10
A
329 350Right-handed alpha
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There are 7 sheets in PDB entry 1OZK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 80first strand
Strand 2
A
34 39parallel
Strand 3
A
6 10parallel
Strand 4
A
116 119parallel
Strand 5
A
309 311parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 87first strand
Strand 2
A
92 96anti-parallel
Strand 3
A
109 113anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
275 276anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
268 271parallel
Strand 3
A
172 175parallel
Strand 4
A
210 213parallel
Strand 5
A
240 243parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
257 259anti-parallel
Strand 3
A
263 264anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
294 295anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 365first strand
Strand 2
A
368 374anti-parallel
Strand 3
A
378 384anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il