Analysis of interatomic Contacts of Structural Units in PDB entry:
1OZP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OZP entry

There is 1 chain in PDB entry 1OZP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3LEU 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 1OZP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 30Right-handed alpha
Helix 2
2
A
35 42Right-handed alpha
Helix 3
3
A
84 87Right-handed 310
Helix 4
4
A
90 103Right-handed alpha
Helix 5
5
A
112 114Right-handed 310
Helix 6
6
A
115 125Right-handed alpha
Helix 7
7
A
159 161Right-handed 310
Helix 8
8
A
162 174Right-handed alpha
Helix 9
9
A
184 193Right-handed alpha
Helix 10
10
A
198 200Right-handed 310
Helix 11
11
A
242 245Right-handed 310
Helix 12
12
A
248 265Right-handed alpha
Helix 13
13
A
287 297Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1OZP.

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 53first strand
Strand 2
A
61 68anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
108 111parallel
Strand 5
A
300 309anti-parallel
Strand 6
A
128 139anti-parallel
Strand 7
A
278 284anti-parallel
Strand 8
A
232 240parallel
Strand 9
A
217 224anti-parallel
Strand 10
A
202 207anti-parallel
Strand 11
A
152 156anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il