Analysis of interatomic Contacts of Structural Units in PDB entry:
1P7C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1P7C entry

There are 2 chains in PDB entry 1P7C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 45GLU 371
B
 MET 46ASN 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 1P7C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
61 71Right-handed alpha
Helix 2
2
A
95 109Right-handed alpha
Helix 3
3
A
113 140Right-handed alpha
Helix 4
4
A
165 170Right-handed alpha
Helix 5
5
A
170 179Right-handed alpha
Helix 6
6
A
183 193Right-handed alpha
Helix 7
7
A
209 220Right-handed alpha
Helix 8
8
A
228 251Right-handed alpha
Helix 9
9
A
254 259Right-handed alpha
Helix 10
10
A
260 263Right-handed 310
Helix 11
11
A
283 293Right-handed 310
Helix 12
12
A
294 298Right-handed 310
Helix 13
13
A
305 320Right-handed alpha
Helix 14
14
A
332 344Right-handed alpha
Helix 15
15
A
345 347Right-handed 310
Helix 16
16
A
356 371Right-handed alpha
Helix 17
17
B
61 72Right-handed alpha
Helix 18
18
B
84 90Right-handed alpha
Helix 19
19
B
95 109Right-handed alpha
Helix 20
20
B
113 140Right-handed alpha
Helix 21
21
B
165 170Right-handed alpha
Helix 22
22
B
170 179Right-handed alpha
Helix 23
23
B
183 193Right-handed alpha
Helix 24
24
B
209 220Right-handed alpha
Helix 25
25
B
228 251Right-handed alpha
Helix 26
26
B
254 259Right-handed alpha
Helix 27
27
B
260 262Right-handed 310
Helix 28
28
B
283 293Right-handed 310
Helix 29
29
B
294 298Right-handed 310
Helix 30
30
B
305 320Right-handed alpha
Helix 31
31
B
332 346Right-handed alpha
Helix 32
32
B
356 373Right-handed alpha
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There are 4 sheets in PDB entry 1P7C. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 328first strand
Strand 2
A
202 207parallel
Strand 3
A
48 54parallel
Strand 4
A
157 162parallel
Strand 5
A
78 81parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 328first strand
Strand 2
A
202 207parallel
Strand 3
A
48 54parallel
Strand 4
A
350 352anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 328first strand
Strand 2
B
202 207parallel
Strand 3
B
48 55parallel
Strand 4
B
157 162parallel
Strand 5
B
78 81parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 328first strand
Strand 2
B
202 207parallel
Strand 3
B
48 55parallel
Strand 4
B
350 352anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il