Analysis of interatomic Contacts of Structural Units in PDB entry:
1P93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1P93 entry

There are 8 chains in PDB entry 1P93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 527GLN 776
E
 ALA 942LYS 950
B
 THR 529GLN 776
F
 ALA 942LYS 950
C
 GLN 527GLN 776
G
 ALA 942LYS 950
D
 GLN 527GLN 776
H
 ALA 942LYS 950
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 1P93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
532 540Right-handed alpha
Helix 2
2
A
555 580Right-handed alpha
Helix 3
3
A
588 614Right-handed alpha
Helix 4
4
A
639 654Right-handed alpha
Helix 5
5
A
659 670Right-handed alpha
Helix 6
6
A
682 703Right-handed alpha
Helix 7
7
A
710 742Right-handed alpha
Helix 8
8
A
750 765Right-handed alpha
Helix 9
9
B
532 539Right-handed alpha
Helix 10
10
B
555 580Right-handed alpha
Helix 11
11
B
588 614Right-handed alpha
Helix 12
12
B
639 656Right-handed alpha
Helix 13
13
B
659 670Right-handed alpha
Helix 14
14
B
682 703Right-handed alpha
Helix 15
15
B
711 742Right-handed alpha
Helix 16
16
B
743 746Right-handed 310
Helix 17
17
B
750 765Right-handed alpha
Helix 18
18
C
532 540Right-handed alpha
Helix 19
19
C
555 580Right-handed alpha
Helix 20
20
C
588 614Right-handed alpha
Helix 21
21
C
639 656Right-handed alpha
Helix 22
22
C
659 670Right-handed alpha
Helix 23
23
C
682 703Right-handed alpha
Helix 24
24
C
710 723Right-handed alpha
Helix 25
25
C
724 742Right-handed alpha
Helix 26
26
C
743 746Right-handed 310
Helix 27
27
C
750 765Right-handed alpha
Helix 28
28
D
532 539Right-handed alpha
Helix 29
29
D
555 580Right-handed alpha
Helix 30
30
D
588 614Right-handed alpha
Helix 31
31
D
639 656Right-handed alpha
Helix 32
32
D
659 671Right-handed alpha
Helix 33
33
D
682 703Right-handed alpha
Helix 34
34
D
710 737Right-handed alpha
Helix 35
35
D
737 742Right-handed alpha
Helix 36
36
D
750 765Right-handed alpha
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There are 7 sheets in PDB entry 1P93. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 622first strand
Strand 2
A
628 629anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
674 675first strand
Strand 2
A
770 771anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
621 624first strand
Strand 2
B
627 629anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
621 622first strand
Strand 2
C
628 629anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
674 675first strand
Strand 2
C
770 771anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
621 624first strand
Strand 2
D
627 629anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
674 675first strand
Strand 2
D
770 771anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il