Analysis of interatomic Contacts of Structural Units in PDB entry:
1PDP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PDP entry

There are 18 chains in PDB entry 1PDP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 288
B
 MET 1GLN 288
C
 MET 1GLN 288
D
 MET 1GLN 288
E
 MET 1GLN 288
F
 MET 1GLN 288
G
 MET 1GLN 288
H
 MET 1GLN 288
I
 MET 1GLN 288
J
 MET 1GLN 288
K
 MET 1GLN 288
L
 MET 1GLN 288
M
 MET 1GLN 288
N
 MET 1GLN 288
O
 MET 1GLN 288
P
 MET 1GLN 288
Q
 MET 1GLN 288
R
 MET 1GLN 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 1PDP
There are no sheets in PDB entry 1PDP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il