Analysis of interatomic Contacts of Structural Units in PDB entry:
1PLQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PLQ entry

There is 1 chain in PDB entry 1PLQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1PLQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 19Right-handed alpha
Helix 2
2
A
54 56Right-handed 310
Helix 3
3
A
72 78Right-handed alpha
Helix 4
4
A
141 154Right-handed alpha
Helix 5
5
A
191 193Right-handed 310
Helix 6
6
A
209 220Right-handed alpha
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There are 3 sheets in PDB entry 1PLQ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
87 92anti-parallel
Strand 3
A
98 104anti-parallel
Strand 4
A
111 117anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 71first strand
Strand 2
A
25 31anti-parallel
Strand 3
A
34 40anti-parallel
Strand 4
A
46 53anti-parallel
Strand 5
A
244 250anti-parallel
Strand 6
A
235 241anti-parallel
Strand 7
A
224 229anti-parallel
Strand 8
A
135 140anti-parallel
Strand 9
A
196 199anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 208first strand
Strand 2
A
157 163anti-parallel
Strand 3
A
166 172anti-parallel
Strand 4
A
177 182anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il