Analysis of interatomic Contacts of Structural Units in PDB entry:
1PU8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PU8 entry

There are 4 chains in PDB entry 1PU8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1GLY 204
A
 ILE 206LEU 216
B
 LEU 2GLY 204
B
 ILE 206LEU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1PU8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
30 40Right-handed alpha
Helix 3
3
A
44 58Right-handed alpha
Helix 4
4
A
64 75Right-handed alpha
Helix 5
5
A
76 84Right-handed alpha
Helix 6
6
A
85 88Right-handed 310
Helix 7
7
A
89 109Right-handed alpha
Helix 8
8
A
110 118Right-handed alpha
Helix 9
9
A
119 125Right-handed alpha
Helix 10
10
A
130 141Right-handed alpha
Helix 11
11
A
150 160Right-handed alpha
Helix 12
12
A
166 181Right-handed alpha
Helix 13
13
A
181 187Right-handed alpha
Helix 14
14
A
194 213Right-handed alpha
Helix 15
15
B
3 13Right-handed alpha
Helix 16
16
B
30 40Right-handed alpha
Helix 17
17
B
44 58Right-handed alpha
Helix 18
18
B
64 75Right-handed alpha
Helix 19
19
B
76 84Right-handed alpha
Helix 20
20
B
85 88Right-handed 310
Helix 21
21
B
89 109Right-handed alpha
Helix 22
22
B
110 118Right-handed alpha
Helix 23
23
B
119 125Right-handed alpha
Helix 24
24
B
130 141Right-handed alpha
Helix 25
25
B
150 160Right-handed alpha
Helix 26
26
B
166 180Right-handed alpha
Helix 27
27
B
181 188Right-handed alpha
Helix 28
28
B
194 212Right-handed alpha
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There are no sheets in PDB entry 1PU8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il