Analysis of interatomic Contacts of Structural Units in PDB entry:
1PUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PUJ entry

There is 1 chain in PDB entry 1PUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 9THR 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1PUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 21Right-handed alpha
Helix 2
2
A
22 24Right-handed 310
Helix 3
3
A
41 48Right-handed alpha
Helix 4
4
A
59 63Right-handed 310
Helix 5
5
A
64 77Right-handed alpha
Helix 6
6
A
92 94Right-handed 310
Helix 7
7
A
95 114Right-handed alpha
Helix 8
8
A
132 142Right-handed alpha
Helix 9
9
A
182 193Right-handed alpha
Helix 10
10
A
201 217Right-handed alpha
Helix 11
11
A
217 225Right-handed alpha
Helix 12
12
A
233 246Right-handed alpha
Helix 13
13
A
255 269Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1PUJ.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
53 58parallel
Strand 3
A
26 32parallel
Strand 4
A
121 127parallel
Strand 5
A
167 171parallel
Strand 6
A
161 163anti-parallel
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