Analysis of interatomic Contacts of Structural Units in PDB entry:
1PV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PV2 entry

There are 8 chains in PDB entry 1PV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5ALA 280
B
 SER 6ALA 282
C
 THR 5ALA 280
D
 THR 5TYR 281
E
 SER 6TYR 281
F
 THR 5TYR 281
G
 THR 5TYR 281
H
 THR 5TYR 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are105 helices in PDB entry 1PV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 84Right-handed alpha
Helix 2
2
A
118 129Right-handed alpha
Helix 3
3
A
133 139Right-handed alpha
Helix 4
4
A
154 159Right-handed 310
Helix 5
5
A
160 163Right-handed 310
Helix 6
6
A
164 176Right-handed alpha
Helix 7
7
A
186 194Right-handed 310
Helix 8
8
A
210 215Right-handed alpha
Helix 9
9
A
217 221Right-handed 310
Helix 10
10
A
230 239Right-handed alpha
Helix 11
11
A
262 264Right-handed 310
Helix 12
12
A
265 280Right-handed alpha
Helix 13
13
B
22 27Right-handed alpha
Helix 14
14
B
74 88Right-handed alpha
Helix 15
15
B
105 109Right-handed 310
Helix 16
16
B
115 129Right-handed alpha
Helix 17
17
B
133 138Right-handed alpha
Helix 18
18
B
154 159Right-handed 310
Helix 19
19
B
160 163Right-handed 310
Helix 20
20
B
164 177Right-handed alpha
Helix 21
21
B
186 195Right-handed 310
Helix 22
22
B
210 215Right-handed alpha
Helix 23
23
B
217 221Right-handed 310
Helix 24
24
B
230 238Right-handed alpha
Helix 25
25
B
262 264Right-handed 310
Helix 26
26
B
265 281Right-handed alpha
Helix 27
27
C
74 88Right-handed alpha
Helix 28
28
C
105 109Right-handed 310
Helix 29
29
C
115 129Right-handed alpha
Helix 30
30
C
133 138Right-handed alpha
Helix 31
31
C
154 159Right-handed 310
Helix 32
32
C
160 163Right-handed 310
Helix 33
33
C
164 177Right-handed alpha
Helix 34
34
C
186 195Right-handed 310
Helix 35
35
C
210 215Right-handed alpha
Helix 36
36
C
216 221Right-handed 310
Helix 37
37
C
230 238Right-handed alpha
Helix 38
38
C
262 264Right-handed 310
Helix 39
39
C
265 279Right-handed alpha
Helix 40
40
D
74 88Right-handed alpha
Helix 41
41
D
105 109Right-handed 310
Helix 42
42
D
115 129Right-handed alpha
Helix 43
43
D
133 138Right-handed alpha
Helix 44
44
D
154 159Right-handed 310
Helix 45
45
D
160 163Right-handed 310
Helix 46
46
D
164 177Right-handed alpha
Helix 47
47
D
186 195Right-handed 310
Helix 48
48
D
210 215Right-handed alpha
Helix 49
49
D
216 221Right-handed 310
Helix 50
50
D
230 238Right-handed alpha
Helix 51
51
D
262 264Right-handed 310
Helix 52
52
D
265 281Right-handed alpha
Helix 53
53
E
22 30Right-handed alpha
Helix 54
54
E
74 88Right-handed alpha
Helix 55
55
E
105 109Right-handed 310
Helix 56
56
E
115 129Right-handed alpha
Helix 57
57
E
133 139Right-handed alpha
Helix 58
58
E
154 159Right-handed 310
Helix 59
59
E
160 163Right-handed 310
Helix 60
60
E
164 177Right-handed alpha
Helix 61
61
E
186 196Right-handed 310
Helix 62
62
E
210 215Right-handed alpha
Helix 63
63
E
216 221Right-handed 310
Helix 64
64
E
230 238Right-handed alpha
Helix 65
65
E
262 264Right-handed 310
Helix 66
66
E
265 279Right-handed alpha
Helix 67
67
F
74 88Right-handed alpha
Helix 68
68
F
105 109Right-handed 310
Helix 69
69
F
116 129Right-handed alpha
Helix 70
70
F
133 139Right-handed alpha
Helix 71
71
F
154 159Right-handed 310
Helix 72
72
F
160 163Right-handed 310
Helix 73
73
F
164 177Right-handed alpha
Helix 74
74
F
186 195Right-handed 310
Helix 75
75
F
210 215Right-handed alpha
Helix 76
76
F
217 221Right-handed 310
Helix 77
77
F
230 239Right-handed alpha
Helix 78
78
F
265 280Right-handed alpha
Helix 79
79
G
74 88Right-handed alpha
Helix 80
80
G
105 109Right-handed 310
Helix 81
81
G
116 129Right-handed alpha
Helix 82
82
G
133 140Right-handed alpha
Helix 83
83
G
154 159Right-handed 310
Helix 84
84
G
160 163Right-handed 310
Helix 85
85
G
164 177Right-handed alpha
Helix 86
86
G
186 195Right-handed 310
Helix 87
87
G
210 215Right-handed alpha
Helix 88
88
G
216 221Right-handed 310
Helix 89
89
G
230 239Right-handed alpha
Helix 90
90
G
262 264Right-handed 310
Helix 91
91
G
265 281Right-handed alpha
Helix 92
92
H
22 30Right-handed alpha
Helix 93
93
H
74 88Right-handed alpha
Helix 94
94
H
105 109Right-handed 310
Helix 95
95
H
115 129Right-handed alpha
Helix 96
96
H
133 138Right-handed alpha
Helix 97
97
H
154 159Right-handed 310
Helix 98
98
H
160 163Right-handed 310
Helix 99
99
H
164 177Right-handed alpha
Helix 100
100
H
186 196Right-handed 310
Helix 101
101
H
210 215Right-handed alpha
Helix 102
102
H
217 221Right-handed 310
Helix 103
103
H
230 238Right-handed alpha
Helix 104
104
H
262 264Right-handed 310
Helix 105
105
H
265 279Right-handed alpha
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There are 25 sheets in PDB entry 1PV2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
68 70parallel
Strand 3
A
60 62anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
93 96parallel
Strand 3
A
131 132parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
181 183parallel
Strand 3
A
257 259parallel
Strand 4
A
252 254anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 206first strand
Strand 2
A
241 242parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
68 70parallel
Strand 3
B
60 62anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
92 96parallel
Strand 3
B
50 54parallel
Strand 4
B
146 151parallel
Strand 5
B
180 184parallel
Strand 6
B
257 260parallel
Strand 7
B
251 254anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 206first strand
Strand 2
B
241 242parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 11first strand
Strand 2
C
18 20anti-parallel
Strand 3
C
68 70parallel
Strand 4
C
60 62anti-parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 132first strand
Strand 2
C
92 96parallel
Strand 3
C
51 54parallel
Strand 4
C
148 151parallel
Strand 5
C
180 184parallel
Strand 6
C
257 260parallel
Strand 7
C
251 254anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
205 206first strand
Strand 2
C
241 242parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 11first strand
Strand 2
D
18 20anti-parallel
Strand 3
D
68 70parallel
Strand 4
D
60 62anti-parallel
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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
131 132first strand
Strand 2
D
92 96parallel
Strand 3
D
50 54parallel
Strand 4
D
146 151parallel
Strand 5
D
180 184parallel
Strand 6
D
257 260parallel
Strand 7
D
251 254anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
205 206first strand
Strand 2
D
241 242parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 11first strand
Strand 2
E
18 20anti-parallel
Strand 3
E
68 70parallel
Strand 4
E
60 62anti-parallel
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There are 7 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
131 132first strand
Strand 2
E
92 96parallel
Strand 3
E
50 54parallel
Strand 4
E
146 151parallel
Strand 5
E
180 184parallel
Strand 6
E
257 260parallel
Strand 7
E
251 254anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
205 206first strand
Strand 2
E
241 242parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 11first strand
Strand 2
F
18 20anti-parallel
Strand 3
F
68 70parallel
Strand 4
F
60 62anti-parallel
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There are 7 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
131 132first strand
Strand 2
F
92 96parallel
Strand 3
F
50 54parallel
Strand 4
F
146 151parallel
Strand 5
F
180 184parallel
Strand 6
F
257 260parallel
Strand 7
F
251 254anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
205 206first strand
Strand 2
F
241 242parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
10 11first strand
Strand 2
G
18 20anti-parallel
Strand 3
G
68 70parallel
Strand 4
G
60 62anti-parallel
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There are 7 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
131 132first strand
Strand 2
G
91 96parallel
Strand 3
G
50 54parallel
Strand 4
G
146 151parallel
Strand 5
G
180 184parallel
Strand 6
G
257 260parallel
Strand 7
G
251 254anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
205 206first strand
Strand 2
G
241 242parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
18 20anti-parallel
Strand 3
H
68 70parallel
Strand 4
H
60 62anti-parallel
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There are 7 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
131 132first strand
Strand 2
H
92 96parallel
Strand 3
H
50 54parallel
Strand 4
H
146 151parallel
Strand 5
H
180 184parallel
Strand 6
H
257 260parallel
Strand 7
H
251 254anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
205 206first strand
Strand 2
H
241 242parallel
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