Analysis of interatomic Contacts of Structural Units in PDB entry:
1PVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PVT entry

There is 1 chain in PDB entry 1PVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLY 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1PVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 18Right-handed alpha
Helix 2
2
A
66 71Right-handed alpha
Helix 3
3
A
73 75Right-handed 310
Helix 4
4
A
100 114Right-handed alpha
Helix 5
5
A
126 133Right-handed alpha
Helix 6
6
A
141 146Right-handed alpha
Helix 7
7
A
149 156Right-handed alpha
Helix 8
8
A
170 181Right-handed alpha
Helix 9
9
A
200 223Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1PVT.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 51first strand
Strand 2
A
85 92anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
56 61anti-parallel
Strand 5
A
26 32anti-parallel
Strand 6
A
120 124anti-parallel
Strand 7
A
194 198anti-parallel
Strand 8
A
186 189anti-parallel
Strand 9
A
161 163parallel
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