Analysis of interatomic Contacts of Structural Units in PDB entry:
1PWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PWW entry

There are 4 chains in PDB entry 1PWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 29SER 776
B
ARG 28SER 776
C
LYS 6THR 16
D
LYS 6THR 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 81 helices in PDB entry 1PWW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
30 43Right-handed alpha
Helix 2
2
A
54 64Right-handed alpha
Helix 3
3
A
67 77Right-handed alpha
Helix 4
4
A
87 91Right-handed 310
Helix 5
5
A
99 103Right-handed 310
Helix 6
6
A
140 158Right-handed alpha
Helix 7
7
A
159 164Right-handed 310
Helix 8
8
A
167 179Right-handed alpha
Helix 9
9
A
183 190Right-handed alpha
Helix 10
10
A
191 196Right-handed alpha
Helix 11
11
A
202 208Right-handed alpha
Helix 12
12
A
209 226Right-handed alpha
Helix 13
13
A
229 237Right-handed alpha
Helix 14
14
A
237 250Right-handed alpha
Helix 15
15
A
252 262Right-handed alpha
Helix 16
16
A
263 278Right-handed alpha
Helix 17
17
A
278 285Right-handed alpha
Helix 18
18
A
286 296Right-handed alpha
Helix 19
19
A
303 310Right-handed alpha
Helix 20
20
A
312 322Right-handed alpha
Helix 21
21
A
323 327Right-handed 310
Helix 22
22
A
331 345Right-handed alpha
Helix 23
23
A
369 383Right-handed alpha
Helix 24
24
A
387 396Right-handed alpha
Helix 25
25
A
405 423Right-handed alpha
Helix 26
26
A
442 446Right-handed 310
Helix 27
27
A
447 452Right-handed alpha
Helix 28
28
A
464 473Right-handed alpha
Helix 29
29
A
551 575Right-handed alpha
Helix 30
30
A
591 608Right-handed alpha
Helix 31
31
A
611 625Right-handed alpha
Helix 32
32
A
635 638Right-handed 310
Helix 33
33
A
639 644Right-handed alpha
Helix 34
34
A
648 652Right-handed 310
Helix 35
35
A
679 701Right-handed alpha
Helix 36
36
A
707 710Right-handed 310
Helix 37
37
A
711 721Right-handed alpha
Helix 38
38
A
728 731Right-handed 310
Helix 39
39
A
732 745Right-handed alpha
Helix 40
40
A
748 757Right-handed alpha
Helix 41
41
A
759 776Right-handed alpha
Helix 42
42
B
28 43Right-handed alpha
Helix 43
43
B
53 65Right-handed alpha
Helix 44
44
B
67 77Right-handed alpha
Helix 45
45
B
87 91Right-handed 310
Helix 46
46
B
93 97Right-handed 310
Helix 47
47
B
98 102Right-handed alpha
Helix 48
48
B
140 157Right-handed alpha
Helix 49
49
B
160 164Right-handed 310
Helix 50
50
B
167 179Right-handed alpha
Helix 51
51
B
183 190Right-handed alpha
Helix 52
52
B
191 196Right-handed alpha
Helix 53
53
B
202 209Right-handed alpha
Helix 54
54
B
209 226Right-handed alpha
Helix 55
55
B
226 237Right-handed alpha
Helix 56
56
B
237 249Right-handed alpha
Helix 57
57
B
251 261Right-handed alpha
Helix 58
58
B
263 278Right-handed alpha
Helix 59
59
B
278 283Right-handed alpha
Helix 60
60
B
286 298Right-handed alpha
Helix 61
61
B
303 310Right-handed alpha
Helix 62
62
B
312 322Right-handed alpha
Helix 63
63
B
323 327Right-handed 310
Helix 64
64
B
331 346Right-handed alpha
Helix 65
65
B
369 383Right-handed alpha
Helix 66
66
B
387 396Right-handed alpha
Helix 67
67
B
405 421Right-handed alpha
Helix 68
68
B
443 454Right-handed alpha
Helix 69
69
B
464 473Right-handed alpha
Helix 70
70
B
551 575Right-handed alpha
Helix 71
71
B
591 610Right-handed alpha
Helix 72
72
B
611 625Right-handed alpha
Helix 73
73
B
635 638Right-handed 310
Helix 74
74
B
639 644Right-handed alpha
Helix 75
75
B
679 701Right-handed alpha
Helix 76
76
B
707 710Right-handed 310
Helix 77
77
B
711 722Right-handed alpha
Helix 78
78
B
728 731Right-handed 310
Helix 79
79
B
732 745Right-handed alpha
Helix 80
80
B
748 759Right-handed alpha
Helix 81
81
B
759 775Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 1PWW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
44 47first strand
Strand 2
A
80 84parallel
Strand 3
A
128 131parallel
Strand 4
A
119 122anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
436 441first strand
Strand 2
A
499 504anti-parallel
Strand 3
A
541 550parallel
Strand 4
A
525 536anti-parallel
Strand 5
A
477 480anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
485 487first strand
Strand 2
A
518 521anti-parallel
Strand 3
A
511 513anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
583 586first strand
Strand 2
A
629 632parallel
Strand 3
A
665 669parallel
Strand 4
A
657 660anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
44 45first strand
Strand 2
B
80 83parallel
Strand 3
B
128 131parallel
Strand 4
B
119 122anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
103 105first strand
Strand 2
B
111 113anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
436 441first strand
Strand 2
B
499 504anti-parallel
Strand 3
B
540 550parallel
Strand 4
B
525 537anti-parallel
Strand 5
B
477 480anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
485 487first strand
Strand 2
B
518 521anti-parallel
Strand 3
B
511 514anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
583 586first strand
Strand 2
B
629 632parallel
Strand 3
B
665 669parallel
Strand 4
B
657 660anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il