Analysis of interatomic Contacts of Structural Units in PDB entry:
1Q0R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Q0R entry

There is 1 chain in PDB entry 1Q0R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ALA 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1Q0R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 39Right-handed 310
Helix 2
2
A
40 49Right-handed alpha
Helix 3
3
A
76 91Right-handed alpha
Helix 4
4
A
102 115Right-handed alpha
Helix 5
5
A
133 144Right-handed alpha
Helix 6
6
A
155 167Right-handed alpha
Helix 7
7
A
171 188Right-handed alpha
Helix 8
8
A
194 209Right-handed alpha
Helix 9
9
A
217 222Right-handed 310
Helix 10
10
A
226 236Right-handed 310
Helix 11
11
A
254 262Right-handed alpha
Helix 12
12
A
279 281Right-handed 310
Helix 13
13
A
282 297Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1Q0R.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 8first strand
Strand 2
A
11 18anti-parallel
Strand 3
A
53 57anti-parallel
Strand 4
A
25 29parallel
Strand 5
A
96 101parallel
Strand 6
A
119 125parallel
Strand 7
A
240 245parallel
Strand 8
A
266 271parallel
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