Analysis of interatomic Contacts of Structural Units in PDB entry:
1Q32


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Q32 entry

There are 4 chains in PDB entry 1Q32 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 79LEU 538
B
GLY 79ARG 540
C
GLY 79HIS 541
D
GLY 79LEU 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 1Q32. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
104 110Right-handed alpha
Helix 2
2
A
126 131Right-handed alpha
Helix 3
3
A
153 157Right-handed 310
Helix 4
4
A
158 166Right-handed alpha
Helix 5
5
A
205 211Right-handed alpha
Helix 6
6
A
231 243Right-handed alpha
Helix 7
7
A
246 253Right-handed alpha
Helix 8
8
A
253 259Right-handed alpha
Helix 9
9
A
262 266Right-handed 310
Helix 10
10
A
281 293Right-handed alpha
Helix 11
11
A
324 329Right-handed alpha
Helix 12
12
A
329 336Right-handed alpha
Helix 13
13
A
355 367Right-handed alpha
Helix 14
14
A
377 381Right-handed 310
Helix 15
15
A
385 393Right-handed 310
Helix 16
16
A
397 399Right-handed 310
Helix 17
17
A
400 410Right-handed alpha
Helix 18
18
A
467 472Right-handed alpha
Helix 19
19
A
490 492Right-handed 310
Helix 20
20
A
504 506Right-handed 310
Helix 21
21
B
104 110Right-handed alpha
Helix 22
22
B
126 131Right-handed alpha
Helix 23
23
B
158 166Right-handed alpha
Helix 24
24
B
205 211Right-handed alpha
Helix 25
25
B
231 243Right-handed alpha
Helix 26
26
B
246 253Right-handed alpha
Helix 27
27
B
253 259Right-handed alpha
Helix 28
28
B
262 266Right-handed 310
Helix 29
29
B
281 294Right-handed alpha
Helix 30
30
B
324 329Right-handed alpha
Helix 31
31
B
329 336Right-handed alpha
Helix 32
32
B
355 367Right-handed alpha
Helix 33
33
B
377 381Right-handed 310
Helix 34
34
B
385 393Right-handed 310
Helix 35
35
B
397 399Right-handed 310
Helix 36
36
B
400 410Right-handed alpha
Helix 37
37
B
467 472Right-handed alpha
Helix 38
38
B
490 492Right-handed 310
Helix 39
39
B
504 506Right-handed 310
Helix 40
40
C
104 110Right-handed alpha
Helix 41
41
C
126 131Right-handed alpha
Helix 42
42
C
158 166Right-handed alpha
Helix 43
43
C
205 211Right-handed alpha
Helix 44
44
C
231 243Right-handed alpha
Helix 45
45
C
246 253Right-handed alpha
Helix 46
46
C
253 259Right-handed alpha
Helix 47
47
C
262 266Right-handed 310
Helix 48
48
C
281 293Right-handed alpha
Helix 49
49
C
324 329Right-handed alpha
Helix 50
50
C
329 336Right-handed alpha
Helix 51
51
C
355 367Right-handed alpha
Helix 52
52
C
377 381Right-handed 310
Helix 53
53
C
385 393Right-handed 310
Helix 54
54
C
397 399Right-handed 310
Helix 55
55
C
400 410Right-handed alpha
Helix 56
56
C
467 472Right-handed alpha
Helix 57
57
C
490 492Right-handed 310
Helix 58
58
C
504 506Right-handed 310
Helix 59
59
D
104 110Right-handed alpha
Helix 60
60
D
126 131Right-handed alpha
Helix 61
61
D
153 157Right-handed 310
Helix 62
62
D
158 165Right-handed alpha
Helix 63
63
D
205 211Right-handed alpha
Helix 64
64
D
231 243Right-handed alpha
Helix 65
65
D
246 253Right-handed alpha
Helix 66
66
D
253 259Right-handed alpha
Helix 67
67
D
262 266Right-handed 310
Helix 68
68
D
281 293Right-handed alpha
Helix 69
69
D
324 329Right-handed alpha
Helix 70
70
D
329 336Right-handed alpha
Helix 71
71
D
355 367Right-handed alpha
Helix 72
72
D
377 381Right-handed 310
Helix 73
73
D
385 393Right-handed 310
Helix 74
74
D
397 399Right-handed 310
Helix 75
75
D
400 410Right-handed alpha
Helix 76
76
D
467 472Right-handed alpha
Helix 77
77
D
490 492Right-handed 310
Helix 78
78
D
504 506Right-handed 310
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There are 20 sheets in PDB entry 1Q32. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
102 103first strand
Strand 2
A
81 85parallel
Strand 3
A
215 218anti-parallel
Strand 4
A
194 200anti-parallel
Strand 5
A
185 190anti-parallel
Strand 6
A
114 120anti-parallel
Strand 7
A
139 145parallel
Strand 8
A
168 173parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
102 103first strand
Strand 2
A
81 85parallel
Strand 3
A
215 218anti-parallel
Strand 4
A
194 200anti-parallel
Strand 5
A
222 224anti-parallel
Strand 6
A
260 261anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
124 125first strand
Strand 2
A
149 150parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
269 273first strand
Strand 2
A
482 488anti-parallel
Strand 3
A
458 462anti-parallel
Strand 4
A
434 441anti-parallel
Strand 5
A
303 309anti-parallel
Strand 6
A
368 373parallel
Strand 7
A
414 416parallel
Strand 8
A
526 527anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
455 456first strand
Strand 2
A
498 502anti-parallel
Strand 3
A
517 519parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
81 84first strand
Strand 2
B
215 218anti-parallel
Strand 3
B
194 200anti-parallel
Strand 4
B
185 190anti-parallel
Strand 5
B
114 120anti-parallel
Strand 6
B
139 145parallel
Strand 7
B
168 173parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
81 84first strand
Strand 2
B
215 218anti-parallel
Strand 3
B
194 200anti-parallel
Strand 4
B
222 224anti-parallel
Strand 5
B
260 261anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
124 125first strand
Strand 2
B
149 150parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
269 273first strand
Strand 2
B
482 488anti-parallel
Strand 3
B
458 462anti-parallel
Strand 4
B
434 441anti-parallel
Strand 5
B
303 309anti-parallel
Strand 6
B
368 373parallel
Strand 7
B
414 416parallel
Strand 8
B
526 527anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
455 456first strand
Strand 2
B
498 502anti-parallel
Strand 3
B
517 519parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
102 103first strand
Strand 2
C
81 85parallel
Strand 3
C
215 218anti-parallel
Strand 4
C
194 200anti-parallel
Strand 5
C
185 190anti-parallel
Strand 6
C
114 120anti-parallel
Strand 7
C
139 145parallel
Strand 8
C
168 173parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
102 103first strand
Strand 2
C
81 85parallel
Strand 3
C
215 218anti-parallel
Strand 4
C
194 200anti-parallel
Strand 5
C
222 224anti-parallel
Strand 6
C
260 261anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
124 125first strand
Strand 2
C
149 150parallel
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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
269 273first strand
Strand 2
C
482 488anti-parallel
Strand 3
C
458 462anti-parallel
Strand 4
C
434 440anti-parallel
Strand 5
C
304 309anti-parallel
Strand 6
C
368 373parallel
Strand 7
C
414 416parallel
Strand 8
C
526 527anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
455 456first strand
Strand 2
C
498 502anti-parallel
Strand 3
C
517 519parallel
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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
81 84first strand
Strand 2
D
215 218anti-parallel
Strand 3
D
194 200anti-parallel
Strand 4
D
185 190anti-parallel
Strand 5
D
114 120anti-parallel
Strand 6
D
139 145parallel
Strand 7
D
168 173parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
81 84first strand
Strand 2
D
215 218anti-parallel
Strand 3
D
194 200anti-parallel
Strand 4
D
222 224anti-parallel
Strand 5
D
260 261anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
124 125first strand
Strand 2
D
149 150parallel
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There are 8 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
269 273first strand
Strand 2
D
482 488anti-parallel
Strand 3
D
458 462anti-parallel
Strand 4
D
434 440anti-parallel
Strand 5
D
304 309anti-parallel
Strand 6
D
368 373parallel
Strand 7
D
414 416parallel
Strand 8
D
526 527anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
455 456first strand
Strand 2
D
498 502anti-parallel
Strand 3
D
517 519parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il