Analysis of interatomic Contacts of Structural Units in PDB entry:
1Q67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Q67 entry

There are 2 chains in PDB entry 1Q67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 22ASP 228
B
 PHE 17ALA 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1Q67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 31Right-handed alpha
Helix 2
2
A
159 170Right-handed alpha
Helix 3
3
A
170 177Right-handed alpha
Helix 4
4
A
207 224Right-handed alpha
Helix 5
5
B
26 30Right-handed 310
Helix 6
6
B
159 170Right-handed alpha
Helix 7
7
B
170 177Right-handed alpha
Helix 8
8
B
207 224Right-handed alpha
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There are 2 sheets in PDB entry 1Q67. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 157first strand
Strand 2
A
140 146anti-parallel
Strand 3
A
55 70anti-parallel
Strand 4
A
34 50anti-parallel
Strand 5
A
200 205anti-parallel
Strand 6
A
190 194anti-parallel
Strand 7
A
183 187anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 157first strand
Strand 2
B
140 146anti-parallel
Strand 3
B
55 70anti-parallel
Strand 4
B
34 50anti-parallel
Strand 5
B
200 205anti-parallel
Strand 6
B
190 194anti-parallel
Strand 7
B
183 187anti-parallel
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