Analysis of interatomic Contacts of Structural Units in PDB entry:
1Q7B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Q7B entry

There are 4 chains in PDB entry 1Q7B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2VAL 244
B
 ASN 2VAL 244
C
 ASN 2VAL 244
D
 ASN 2VAL 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 1Q7B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 28Right-handed alpha
Helix 2
2
A
38 50Right-handed alpha
Helix 3
3
A
62 77Right-handed alpha
Helix 4
4
A
94 98Right-handed 310
Helix 5
5
A
99 111Right-handed alpha
Helix 6
6
A
111 129Right-handed alpha
Helix 7
7
A
138 144Right-handed alpha
Helix 8
8
A
148 170Right-handed alpha
Helix 9
9
A
186 191Right-handed alpha
Helix 10
10
A
193 202Right-handed alpha
Helix 11
11
A
211 224Right-handed alpha
Helix 12
12
A
225 228Right-handed 310
Helix 13
13
B
15 28Right-handed alpha
Helix 14
14
B
38 50Right-handed alpha
Helix 15
15
B
62 77Right-handed alpha
Helix 16
16
B
94 98Right-handed 310
Helix 17
17
B
99 111Right-handed alpha
Helix 18
18
B
111 129Right-handed alpha
Helix 19
19
B
138 144Right-handed alpha
Helix 20
20
B
148 170Right-handed alpha
Helix 21
21
B
186 190Right-handed 310
Helix 22
22
B
196 202Right-handed alpha
Helix 23
23
B
211 224Right-handed alpha
Helix 24
24
B
225 228Right-handed 310
Helix 25
25
C
15 28Right-handed alpha
Helix 26
26
C
38 50Right-handed alpha
Helix 27
27
C
62 77Right-handed alpha
Helix 28
28
C
99 111Right-handed alpha
Helix 29
29
C
111 129Right-handed alpha
Helix 30
30
C
139 144Right-handed alpha
Helix 31
31
C
148 170Right-handed alpha
Helix 32
32
C
186 191Right-handed alpha
Helix 33
33
C
193 202Right-handed alpha
Helix 34
34
C
211 224Right-handed alpha
Helix 35
35
C
225 228Right-handed 310
Helix 36
36
D
15 28Right-handed alpha
Helix 37
37
D
38 50Right-handed alpha
Helix 38
38
D
62 77Right-handed alpha
Helix 39
39
D
94 98Right-handed 310
Helix 40
40
D
99 111Right-handed alpha
Helix 41
41
D
111 129Right-handed alpha
Helix 42
42
D
138 144Right-handed alpha
Helix 43
43
D
148 170Right-handed alpha
Helix 44
44
D
186 191Right-handed alpha
Helix 45
45
D
193 202Right-handed alpha
Helix 46
46
D
211 224Right-handed alpha
Helix 47
47
D
225 228Right-handed 310
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There are 4 sheets in PDB entry 1Q7B. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
31 36parallel
Strand 3
A
7 10parallel
Strand 4
A
82 85parallel
Strand 5
A
131 136parallel
Strand 6
A
174 181parallel
Strand 7
A
234 237parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
31 36parallel
Strand 3
B
7 10parallel
Strand 4
B
82 85parallel
Strand 5
B
131 136parallel
Strand 6
B
174 181parallel
Strand 7
B
234 237parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 57first strand
Strand 2
C
31 36parallel
Strand 3
C
7 10parallel
Strand 4
C
82 85parallel
Strand 5
C
131 136parallel
Strand 6
C
174 181parallel
Strand 7
C
234 237parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 57first strand
Strand 2
D
31 36parallel
Strand 3
D
7 10parallel
Strand 4
D
82 85parallel
Strand 5
D
131 136parallel
Strand 6
D
174 181parallel
Strand 7
D
234 237parallel
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