Analysis of interatomic Contacts of Structural Units in PDB entry:
1Q7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Q7E entry

There is 1 chain in PDB entry 1Q7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3GLU 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1Q7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 31Right-handed alpha
Helix 2
2
A
45 49Right-handed 310
Helix 3
3
A
59 64Right-handed alpha
Helix 4
4
A
78 92Right-handed alpha
Helix 5
5
A
110 118Right-handed alpha
Helix 6
6
A
141 149Right-handed alpha
Helix 7
7
A
150 155Right-handed alpha
Helix 8
8
A
171 193Right-handed alpha
Helix 9
9
A
202 210Right-handed alpha
Helix 10
10
A
210 224Right-handed alpha
Helix 11
11
A
275 277Right-handed 310
Helix 12
12
A
278 286Right-handed alpha
Helix 13
13
A
288 293Right-handed 310
Helix 14
14
A
299 304Right-handed alpha
Helix 15
15
A
306 319Right-handed alpha
Helix 16
16
A
322 331Right-handed alpha
Helix 17
17
A
332 334Right-handed 310
Helix 18
18
A
342 349Right-handed alpha
Helix 19
19
A
349 355Right-handed alpha
Helix 20
20
A
394 402Right-handed alpha
Helix 21
21
A
405 419Right-handed alpha
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There are 3 sheets in PDB entry 1Q7E. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
34 39parallel
Strand 3
A
11 14parallel
Strand 4
A
94 97parallel
Strand 5
A
122 127parallel
Strand 6
A
197 201parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 258first strand
Strand 2
A
269 273anti-parallel
Strand 3
A
337 339anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 363first strand
Strand 2
A
367 372anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il