Analysis of interatomic Contacts of Structural Units in PDB entry:
1Q7Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Q7Q entry

There are 2 chains in PDB entry 1Q7Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 565
B
 MET 1LYS 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 1Q7Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 14Right-handed alpha
Helix 2
2
A
22 28Right-handed alpha
Helix 3
3
A
37 42Right-handed alpha
Helix 4
4
A
42 57Right-handed alpha
Helix 5
5
A
69 76Right-handed alpha
Helix 6
6
A
81 98Right-handed alpha
Helix 7
7
A
120 139Right-handed alpha
Helix 8
8
A
150 165Right-handed alpha
Helix 9
9
A
187 197Right-handed alpha
Helix 10
10
A
210 224Right-handed alpha
Helix 11
11
A
250 256Right-handed alpha
Helix 12
12
A
257 264Right-handed alpha
Helix 13
13
A
276 288Right-handed alpha
Helix 14
14
A
327 337Right-handed alpha
Helix 15
15
A
339 353Right-handed alpha
Helix 16
16
A
363 367Right-handed 310
Helix 17
17
A
368 383Right-handed alpha
Helix 18
18
A
393 404Right-handed alpha
Helix 19
19
A
416 431Right-handed alpha
Helix 20
20
A
446 464Right-handed alpha
Helix 21
21
A
466 468Right-handed 310
Helix 22
22
A
485 499Right-handed alpha
Helix 23
23
A
505 509Right-handed 310
Helix 24
24
A
515 530Right-handed alpha
Helix 25
25
A
541 555Right-handed alpha
Helix 26
26
B
3 14Right-handed alpha
Helix 27
27
B
22 28Right-handed alpha
Helix 28
28
B
34 40Right-handed 310
Helix 29
29
B
42 57Right-handed alpha
Helix 30
30
B
69 75Right-handed alpha
Helix 31
31
B
76 77Right-handed 310
Helix 32
32
B
78 80Right-handed 310
Helix 33
33
B
81 98Right-handed alpha
Helix 34
34
B
120 139Right-handed alpha
Helix 35
35
B
150 165Right-handed alpha
Helix 36
36
B
187 197Right-handed alpha
Helix 37
37
B
210 224Right-handed alpha
Helix 38
38
B
250 256Right-handed alpha
Helix 39
39
B
257 264Right-handed alpha
Helix 40
40
B
276 288Right-handed alpha
Helix 41
41
B
327 335Right-handed alpha
Helix 42
42
B
339 352Right-handed alpha
Helix 43
43
B
363 367Right-handed 310
Helix 44
44
B
368 383Right-handed alpha
Helix 45
45
B
393 402Right-handed alpha
Helix 46
46
B
416 431Right-handed alpha
Helix 47
47
B
446 465Right-handed alpha
Helix 48
48
B
466 468Right-handed 310
Helix 49
49
B
484 498Right-handed alpha
Helix 50
50
B
516 529Right-handed alpha
Helix 51
51
B
541 555Right-handed alpha
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There are 6 sheets in PDB entry 1Q7Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
268 269parallel
Strand 3
A
228 232parallel
Strand 4
A
202 206parallel
Strand 5
A
170 174parallel
Strand 6
A
143 148parallel
Strand 7
A
101 106parallel
Strand 8
A
60 62parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
309 311anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 502first strand
Strand 2
A
470 473parallel
Strand 3
A
433 437parallel
Strand 4
A
409 410parallel
Strand 5
A
387 390parallel
Strand 6
A
356 360parallel
Strand 7
A
316 319parallel
Strand 8
A
534 537parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
268 269parallel
Strand 3
B
228 232parallel
Strand 4
B
202 206parallel
Strand 5
B
170 174parallel
Strand 6
B
142 148parallel
Strand 7
B
101 106parallel
Strand 8
B
60 62parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 304first strand
Strand 2
B
309 311anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
470 473first strand
Strand 2
B
433 437parallel
Strand 3
B
409 410parallel
Strand 4
B
387 390parallel
Strand 5
B
356 360parallel
Strand 6
B
316 319parallel
Strand 7
B
534 537parallel
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