Analysis of interatomic Contacts of Structural Units in PDB entry:
1QAX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QAX entry

There are 2 chains in PDB entry 1QAX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4GLN 428
B
 ASP 504GLU 875
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 1QAX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
29 38Right-handed alpha
Helix 3
3
A
43 51Right-handed alpha
Helix 4
4
A
85 99Right-handed alpha
Helix 5
5
A
123 134Right-handed alpha
Helix 6
6
A
134 144Right-handed alpha
Helix 7
7
A
146 152Right-handed alpha
Helix 8
8
A
186 206Right-handed alpha
Helix 9
9
A
230 235Right-handed alpha
Helix 10
10
A
240 258Right-handed alpha
Helix 11
11
A
258 280Right-handed alpha
Helix 12
12
A
283 295Right-handed alpha
Helix 13
13
A
329 335Right-handed alpha
Helix 14
14
A
335 346Right-handed alpha
Helix 15
15
A
349 376Right-handed alpha
Helix 16
16
A
377 386Right-handed alpha
Helix 17
17
A
387 392Right-handed alpha
Helix 18
18
A
397 399Right-handed 310
Helix 19
19
A
400 409Right-handed alpha
Helix 20
20
A
414 427Right-handed alpha
Helix 21
21
B
514 527Right-handed alpha
Helix 22
22
B
529 538Right-handed alpha
Helix 23
23
B
543 551Right-handed alpha
Helix 24
24
B
585 599Right-handed alpha
Helix 25
25
B
623 634Right-handed alpha
Helix 26
26
B
634 644Right-handed alpha
Helix 27
27
B
646 652Right-handed alpha
Helix 28
28
B
686 706Right-handed alpha
Helix 29
29
B
730 735Right-handed alpha
Helix 30
30
B
740 758Right-handed alpha
Helix 31
31
B
758 780Right-handed alpha
Helix 32
32
B
783 795Right-handed alpha
Helix 33
33
B
829 835Right-handed alpha
Helix 34
34
B
835 846Right-handed alpha
Helix 35
35
B
849 875Right-handed alpha
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There are 6 sheets in PDB entry 1QAX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 80first strand
Strand 2
A
54 65anti-parallel
Strand 3
B
554 570anti-parallel
Strand 4
B
573 580anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
73 74anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 107first strand
Strand 2
A
222 229anti-parallel
Strand 3
A
315 322anti-parallel
Strand 4
A
305 309anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 164first strand
Strand 2
A
172 180anti-parallel
Strand 3
A
111 119anti-parallel
Strand 4
A
208 214anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
604 607first strand
Strand 2
B
722 729anti-parallel
Strand 3
B
815 822anti-parallel
Strand 4
B
805 809anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
655 664first strand
Strand 2
B
672 680anti-parallel
Strand 3
B
611 619anti-parallel
Strand 4
B
708 714anti-parallel
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