Analysis of interatomic Contacts of Structural Units in PDB entry:
1QB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QB2 entry

There are 2 chains in PDB entry 1QB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 326LYS 432
B
 GLN 326MET 434
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1QB2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
328 342Right-handed alpha
Helix 2
2
A
342 352Right-handed alpha
Helix 3
3
A
364 380Right-handed alpha
Helix 4
4
A
383 389Right-handed alpha
Helix 5
5
A
392 399Right-handed alpha
Helix 6
6
A
400 410Right-handed alpha
Helix 7
7
A
413 431Right-handed alpha
Helix 8
8
B
328 350Right-handed alpha
Helix 9
9
B
365 380Right-handed alpha
Helix 10
10
B
383 389Right-handed alpha
Helix 11
11
B
391 399Right-handed alpha
Helix 12
12
B
400 410Right-handed alpha
Helix 13
13
B
413 433Right-handed alpha
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There are no sheets in PDB entry 1QB2
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il