Analysis of interatomic Contacts of Structural Units in PDB entry:
1QG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QG6 entry

There are 4 chains in PDB entry 1QG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLU 258
B
 GLY 2GLU 258
C
 GLY 2GLU 258
D
 GLY 2GLU 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 1QG6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 31Right-handed alpha
Helix 2
2
A
41 55Right-handed alpha
Helix 3
3
A
67 79Right-handed alpha
Helix 4
4
A
96 101Right-handed 310
Helix 5
5
A
103 108Right-handed alpha
Helix 6
6
A
109 121Right-handed alpha
Helix 7
7
A
121 132Right-handed alpha
Helix 8
8
A
146 150Right-handed 310
Helix 9
9
A
157 178Right-handed alpha
Helix 10
10
A
195 200Right-handed 310
Helix 11
11
A
202 214Right-handed alpha
Helix 12
12
A
221 234Right-handed alpha
Helix 13
13
A
235 238Right-handed 310
Helix 14
14
A
250 253Right-handed 310
Helix 15
15
B
19 31Right-handed alpha
Helix 16
16
B
41 55Right-handed alpha
Helix 17
17
B
67 79Right-handed alpha
Helix 18
18
B
96 101Right-handed 310
Helix 19
19
B
103 108Right-handed alpha
Helix 20
20
B
109 121Right-handed alpha
Helix 21
21
B
121 132Right-handed alpha
Helix 22
22
B
146 150Right-handed 310
Helix 23
23
B
157 178Right-handed alpha
Helix 24
24
B
195 200Right-handed 310
Helix 25
25
B
202 214Right-handed alpha
Helix 26
26
B
221 234Right-handed alpha
Helix 27
27
B
235 238Right-handed 310
Helix 28
28
B
250 253Right-handed 310
Helix 29
29
C
19 31Right-handed alpha
Helix 30
30
C
41 55Right-handed alpha
Helix 31
31
C
67 79Right-handed alpha
Helix 32
32
C
96 101Right-handed 310
Helix 33
33
C
103 108Right-handed alpha
Helix 34
34
C
109 121Right-handed alpha
Helix 35
35
C
121 132Right-handed alpha
Helix 36
36
C
146 150Right-handed 310
Helix 37
37
C
157 178Right-handed alpha
Helix 38
38
C
195 200Right-handed 310
Helix 39
39
C
202 214Right-handed alpha
Helix 40
40
C
221 234Right-handed alpha
Helix 41
41
C
235 238Right-handed 310
Helix 42
42
C
250 253Right-handed 310
Helix 43
43
D
19 31Right-handed alpha
Helix 44
44
D
41 55Right-handed alpha
Helix 45
45
D
67 79Right-handed alpha
Helix 46
46
D
96 101Right-handed 310
Helix 47
47
D
103 108Right-handed alpha
Helix 48
48
D
109 121Right-handed alpha
Helix 49
49
D
121 132Right-handed alpha
Helix 50
50
D
146 150Right-handed 310
Helix 51
51
D
157 178Right-handed alpha
Helix 52
52
D
195 200Right-handed 310
Helix 53
53
D
202 214Right-handed alpha
Helix 54
54
D
221 234Right-handed alpha
Helix 55
55
D
235 238Right-handed 310
Helix 56
56
D
250 253Right-handed 310
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There are 4 sheets in PDB entry 1QG6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
34 39parallel
Strand 3
A
8 11parallel
Strand 4
A
88 90parallel
Strand 5
A
139 145parallel
Strand 6
A
182 189parallel
Strand 7
A
244 247parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
34 39parallel
Strand 3
B
8 11parallel
Strand 4
B
88 90parallel
Strand 5
B
139 145parallel
Strand 6
B
182 189parallel
Strand 7
B
244 247parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 62first strand
Strand 2
C
34 39parallel
Strand 3
C
8 11parallel
Strand 4
C
88 90parallel
Strand 5
C
139 145parallel
Strand 6
C
182 189parallel
Strand 7
C
244 247parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 62first strand
Strand 2
D
34 39parallel
Strand 3
D
8 11parallel
Strand 4
D
88 90parallel
Strand 5
D
139 145parallel
Strand 6
D
182 189parallel
Strand 7
D
244 247parallel
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