Analysis of interatomic Contacts of Structural Units in PDB entry:
1QGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QGJ entry

There are 2 chains in PDB entry 1QGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1ASN 300
B
 GLN 1ASN 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 1QGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 28Right-handed alpha
Helix 2
2
A
30 44Right-handed 310
Helix 3
3
A
52 54Right-handed 310
Helix 4
4
A
61 63Right-handed 310
Helix 5
5
A
74 87Right-handed alpha
Helix 6
6
A
94 109Right-handed alpha
Helix 7
7
A
128 133Right-handed alpha
Helix 8
8
A
141 151Right-handed alpha
Helix 9
9
A
155 166Right-handed alpha
Helix 10
10
A
172 174Right-handed 310
Helix 11
11
A
176 178Right-handed 310
Helix 12
12
A
194 203Right-handed alpha
Helix 13
13
A
226 234Right-handed 310
Helix 14
14
A
240 247Right-handed alpha
Helix 15
15
A
251 253Right-handed 310
Helix 16
16
A
256 264Right-handed alpha
Helix 17
17
A
266 282Right-handed alpha
Helix 18
18
B
14 28Right-handed alpha
Helix 19
19
B
30 44Right-handed 310
Helix 20
20
B
52 54Right-handed 310
Helix 21
21
B
61 63Right-handed 310
Helix 22
22
B
74 87Right-handed alpha
Helix 23
23
B
94 109Right-handed alpha
Helix 24
24
B
128 133Right-handed alpha
Helix 25
25
B
141 151Right-handed alpha
Helix 26
26
B
155 166Right-handed alpha
Helix 27
27
B
172 174Right-handed 310
Helix 28
28
B
176 178Right-handed 310
Helix 29
29
B
194 203Right-handed alpha
Helix 30
30
B
226 234Right-handed 310
Helix 31
31
B
240 247Right-handed alpha
Helix 32
32
B
255 264Right-handed alpha
Helix 33
33
B
266 282Right-handed alpha
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There are 2 sheets in PDB entry 1QGJ. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
213 215anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 171first strand
Strand 2
B
213 215anti-parallel
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