Analysis of interatomic Contacts of Structural Units in PDB entry:
1QHB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QHB entry

There are 6 chains in PDB entry 1QHB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ILE 596
B
 GLY 2ILE 596
C
 GLY 2ILE 596
D
 GLY 2ILE 596
E
 GLY 2ILE 596
F
 GLY 2ILE 596
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are139 helices in PDB entry 1QHB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 29Right-handed alpha
Helix 2
2
A
39 41Right-handed 310
Helix 3
3
A
72 84Right-handed alpha
Helix 4
4
A
87 91Right-handed alpha
Helix 5
5
A
111 115Right-handed alpha
Helix 6
6
A
128 130Right-handed 310
Helix 7
7
A
153 167Right-handed alpha
Helix 8
8
A
173 175Right-handed 310
Helix 9
9
A
179 194Right-handed 310
Helix 10
10
A
196 199Right-handed alpha
Helix 11
11
A
208 213Right-handed alpha
Helix 12
12
A
239 241Right-handed 310
Helix 13
13
A
263 268Right-handed 310
Helix 14
14
A
295 302Right-handed alpha
Helix 15
15
A
323 332Right-handed alpha
Helix 16
16
A
337 349Right-handed alpha
Helix 17
17
A
363 366Right-handed alpha
Helix 18
18
A
376 400Right-handed alpha
Helix 19
19
A
407 422Right-handed alpha
Helix 20
20
A
429 456Right-handed 310
Helix 21
21
A
484 499Right-handed alpha
Helix 22
22
A
530 548Right-handed alpha
Helix 23
23
A
553 577Right-handed alpha
Helix 24
24
B
11 29Right-handed alpha
Helix 25
25
B
72 84Right-handed alpha
Helix 26
26
B
87 91Right-handed alpha
Helix 27
27
B
111 116Right-handed alpha
Helix 28
28
B
128 130Right-handed 310
Helix 29
29
B
153 167Right-handed alpha
Helix 30
30
B
173 175Right-handed 310
Helix 31
31
B
179 193Right-handed 310
Helix 32
32
B
196 199Right-handed alpha
Helix 33
33
B
208 213Right-handed alpha
Helix 34
34
B
239 241Right-handed 310
Helix 35
35
B
263 268Right-handed 310
Helix 36
36
B
295 302Right-handed alpha
Helix 37
37
B
323 332Right-handed alpha
Helix 38
38
B
337 348Right-handed alpha
Helix 39
39
B
363 366Right-handed alpha
Helix 40
40
B
376 399Right-handed alpha
Helix 41
41
B
407 422Right-handed alpha
Helix 42
42
B
429 437Right-handed 310
Helix 43
43
B
439 456Right-handed alpha
Helix 44
44
B
484 499Right-handed alpha
Helix 45
45
B
530 547Right-handed alpha
Helix 46
46
B
553 577Right-handed alpha
Helix 47
47
C
11 29Right-handed alpha
Helix 48
48
C
72 84Right-handed alpha
Helix 49
49
C
87 91Right-handed alpha
Helix 50
50
C
111 115Right-handed alpha
Helix 51
51
C
128 130Right-handed 310
Helix 52
52
C
153 167Right-handed alpha
Helix 53
53
C
173 175Right-handed 310
Helix 54
54
C
179 193Right-handed 310
Helix 55
55
C
196 199Right-handed alpha
Helix 56
56
C
208 213Right-handed alpha
Helix 57
57
C
239 241Right-handed 310
Helix 58
58
C
263 268Right-handed 310
Helix 59
59
C
295 302Right-handed alpha
Helix 60
60
C
323 332Right-handed alpha
Helix 61
61
C
337 348Right-handed alpha
Helix 62
62
C
363 366Right-handed alpha
Helix 63
63
C
376 399Right-handed alpha
Helix 64
64
C
407 422Right-handed alpha
Helix 65
65
C
429 437Right-handed 310
Helix 66
66
C
439 456Right-handed alpha
Helix 67
67
C
484 499Right-handed alpha
Helix 68
68
C
530 547Right-handed alpha
Helix 69
69
C
553 577Right-handed alpha
Helix 70
70
D
11 29Right-handed alpha
Helix 71
71
D
72 84Right-handed alpha
Helix 72
72
D
87 91Right-handed alpha
Helix 73
73
D
111 116Right-handed alpha
Helix 74
74
D
128 130Right-handed 310
Helix 75
75
D
139 141Right-handed 310
Helix 76
76
D
153 167Right-handed alpha
Helix 77
77
D
173 175Right-handed 310
Helix 78
78
D
179 193Right-handed 310
Helix 79
79
D
196 199Right-handed alpha
Helix 80
80
D
208 213Right-handed alpha
Helix 81
81
D
239 241Right-handed 310
Helix 82
82
D
263 268Right-handed 310
Helix 83
83
D
295 302Right-handed alpha
Helix 84
84
D
323 332Right-handed alpha
Helix 85
85
D
337 348Right-handed alpha
Helix 86
86
D
363 366Right-handed alpha
Helix 87
87
D
376 400Right-handed alpha
Helix 88
88
D
407 422Right-handed alpha
Helix 89
89
D
429 437Right-handed 310
Helix 90
90
D
439 456Right-handed alpha
Helix 91
91
D
484 499Right-handed alpha
Helix 92
92
D
530 548Right-handed alpha
Helix 93
93
D
553 577Right-handed alpha
Helix 94
94
E
11 28Right-handed alpha
Helix 95
95
E
72 84Right-handed alpha
Helix 96
96
E
87 91Right-handed alpha
Helix 97
97
E
111 115Right-handed alpha
Helix 98
98
E
128 130Right-handed 310
Helix 99
99
E
153 167Right-handed alpha
Helix 100
100
E
173 175Right-handed 310
Helix 101
101
E
179 194Right-handed 310
Helix 102
102
E
196 199Right-handed alpha
Helix 103
103
E
208 213Right-handed alpha
Helix 104
104
E
239 241Right-handed 310
Helix 105
105
E
263 268Right-handed 310
Helix 106
106
E
295 302Right-handed alpha
Helix 107
107
E
323 332Right-handed alpha
Helix 108
108
E
337 348Right-handed alpha
Helix 109
109
E
363 366Right-handed alpha
Helix 110
110
E
376 400Right-handed alpha
Helix 111
111
E
407 423Right-handed alpha
Helix 112
112
E
429 437Right-handed 310
Helix 113
113
E
439 456Right-handed alpha
Helix 114
114
E
484 499Right-handed alpha
Helix 115
115
E
530 547Right-handed alpha
Helix 116
116
E
553 577Right-handed alpha
Helix 117
117
F
11 29Right-handed alpha
Helix 118
118
F
72 84Right-handed alpha
Helix 119
119
F
87 91Right-handed alpha
Helix 120
120
F
111 115Right-handed alpha
Helix 121
121
F
128 130Right-handed 310
Helix 122
122
F
153 167Right-handed alpha
Helix 123
123
F
173 175Right-handed 310
Helix 124
124
F
179 193Right-handed 310
Helix 125
125
F
196 199Right-handed alpha
Helix 126
126
F
208 213Right-handed alpha
Helix 127
127
F
239 241Right-handed 310
Helix 128
128
F
263 268Right-handed 310
Helix 129
129
F
295 302Right-handed alpha
Helix 130
130
F
323 332Right-handed alpha
Helix 131
131
F
337 349Right-handed alpha
Helix 132
132
F
363 366Right-handed alpha
Helix 133
133
F
376 400Right-handed alpha
Helix 134
134
F
407 422Right-handed alpha
Helix 135
135
F
429 437Right-handed 310
Helix 136
136
F
439 456Right-handed alpha
Helix 137
137
F
484 499Right-handed alpha
Helix 138
138
F
530 548Right-handed alpha
Helix 139
139
F
553 577Right-handed alpha
Back to top of page

There are 26 sheets in PDB entry 1QHB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 253first strand
Strand 2
A
256 258anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
276 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
510 512first strand
Strand 2
A
519 521anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
585 587first strand
Strand 2
A
593 595anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 253first strand
Strand 2
B
256 258anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 273first strand
Strand 2
B
276 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
510 512first strand
Strand 2
B
519 521anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
585 587first strand
Strand 2
B
593 595anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
251 253first strand
Strand 2
C
256 258anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
270 273first strand
Strand 2
C
276 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
510 512first strand
Strand 2
C
519 521anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
585 587first strand
Strand 2
C
593 595anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
251 253first strand
Strand 2
D
256 258anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
270 273first strand
Strand 2
D
276 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
510 512first strand
Strand 2
D
519 521anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
585 587first strand
Strand 2
D
593 595anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
282 285first strand
Strand 2
D
313 318anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
251 253first strand
Strand 2
E
256 258anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
270 273first strand
Strand 2
E
276 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
510 512first strand
Strand 2
E
519 521anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
585 587first strand
Strand 2
E
593 595anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
251 253first strand
Strand 2
F
256 258anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
270 273first strand
Strand 2
F
276 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
510 512first strand
Strand 2
F
519 521anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
585 587first strand
Strand 2
F
593 595anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
282 285first strand
Strand 2
F
313 318anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il