Analysis of interatomic Contacts of Structural Units in PDB entry:
1QLH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QLH entry

There is 1 chain in PDB entry 1QLH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1PHE 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 1QLH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 54Right-handed alpha
Helix 2
2
A
100 105Right-handed alpha
Helix 3
3
A
165 170Right-handed alpha
Helix 4
4
A
171 173Right-handed 310
Helix 5
5
A
174 185Right-handed alpha
Helix 6
6
A
201 214Right-handed alpha
Helix 7
7
A
225 227Right-handed 310
Helix 8
8
A
228 236Right-handed alpha
Helix 9
9
A
249 258Right-handed alpha
Helix 10
10
A
271 282Right-handed alpha
Helix 11
11
A
305 310Right-handed alpha
Helix 12
12
A
318 322Right-handed 310
Helix 13
13
A
323 337Right-handed alpha
Helix 14
14
A
342 346Right-handed 310
Helix 15
15
A
354 365Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 1QLH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 13first strand
Strand 2
A
22 28anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
35 40anti-parallel
Strand 3
A
71 76anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
A
370 373anti-parallel
Strand 3
A
348 351parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
157 159anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
135 137anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 316first strand
Strand 2
A
288 291parallel
Strand 3
A
264 267parallel
Strand 4
A
194 198parallel
Strand 5
A
218 222parallel
Strand 6
A
239 241parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il