Analysis of interatomic Contacts of Structural Units in PDB entry:
1QO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QO4 entry

There is 1 chain in PDB entry 1QO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0SER 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1QO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 29Right-handed alpha
Helix 2
2
A
31 45Right-handed alpha
Helix 3
3
A
51 55Right-handed 310
Helix 4
4
A
63 67Right-handed 310
Helix 5
5
A
76 91Right-handed alpha
Helix 6
6
A
96 112Right-handed alpha
Helix 7
7
A
130 138Right-handed alpha
Helix 8
8
A
144 156Right-handed alpha
Helix 9
9
A
158 166Right-handed alpha
Helix 10
10
A
167 171Right-handed 310
Helix 11
11
A
177 183Right-handed 310
Helix 12
12
A
185 189Right-handed 310
Helix 13
13
A
197 208Right-handed alpha
Helix 14
14
A
230 238Right-handed alpha
Helix 15
15
A
243 252Right-handed alpha
Helix 16
16
A
256 267Right-handed alpha
Helix 17
17
A
267 284Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 1QO4.

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
A
217 219anti-parallel
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