Analysis of interatomic Contacts of Structural Units in PDB entry:
1QOZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QOZ entry

There are 2 chains in PDB entry 1QOZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 2SER 207
B
 CYS 2LEU 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1QOZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 33Right-handed alpha
Helix 2
2
A
56 63Right-handed alpha
Helix 3
3
A
65 79Right-handed alpha
Helix 4
4
A
93 101Right-handed alpha
Helix 5
5
A
163 165Right-handed 310
Helix 6
6
A
183 188Right-handed alpha
Helix 7
7
A
196 206Right-handed alpha
Helix 8
8
B
22 33Right-handed alpha
Helix 9
9
B
56 63Right-handed alpha
Helix 10
10
B
65 79Right-handed alpha
Helix 11
11
B
93 101Right-handed alpha
Helix 12
12
B
163 165Right-handed 310
Helix 13
13
B
183 188Right-handed alpha
Helix 14
14
B
196 206Right-handed alpha
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There are 2 sheets in PDB entry 1QOZ. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
5 8parallel
Strand 3
A
83 86parallel
Strand 4
A
125 130parallel
Strand 5
A
167 171parallel
Strand 6
A
143 146parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 38first strand
Strand 2
B
5 8parallel
Strand 3
B
83 86parallel
Strand 4
B
125 130parallel
Strand 5
B
167 171parallel
Strand 6
B
143 146parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il