Analysis of interatomic Contacts of Structural Units in PDB entry:
1QQE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QQE entry

There is 1 chain in PDB entry 1QQE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 1ASP 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1QQE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 15Right-handed alpha
Helix 2
2
A
20 26Right-handed alpha
Helix 3
3
A
29 50Right-handed alpha
Helix 4
4
A
53 70Right-handed alpha
Helix 5
5
A
72 90Right-handed alpha
Helix 6
6
A
92 110Right-handed alpha
Helix 7
7
A
112 130Right-handed alpha
Helix 8
8
A
133 151Right-handed alpha
Helix 9
9
A
153 171Right-handed alpha
Helix 10
10
A
173 187Right-handed alpha
Helix 11
11
A
194 196Right-handed 310
Helix 12
12
A
197 212Right-handed alpha
Helix 13
13
A
214 224Right-handed alpha
Helix 14
14
A
225 227Right-handed 310
Helix 15
15
A
237 250Right-handed alpha
Helix 16
16
A
255 264Right-handed alpha
Helix 17
17
A
270 289Right-handed alpha
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There are no sheets in PDB entry 1QQE
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il