Analysis of interatomic Contacts of Structural Units in PDB entry:
1QR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QR6 entry

There are 2 chains in PDB entry 1QR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23PRO 573
B
 GLU 1023PRO 1573
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 1QR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 30Right-handed alpha
Helix 2
2
A
36 40Right-handed 310
Helix 3
3
A
41 48Right-handed alpha
Helix 4
4
A
60 74Right-handed alpha
Helix 5
5
A
77 89Right-handed alpha
Helix 6
6
A
92 103Right-handed alpha
Helix 7
7
A
103 112Right-handed alpha
Helix 8
8
A
114 123Right-handed alpha
Helix 9
9
A
138 140Right-handed 310
Helix 10
10
A
142 149Right-handed alpha
Helix 11
11
A
172 176Right-handed 310
Helix 12
12
A
177 192Right-handed alpha
Helix 13
13
A
194 196Right-handed 310
Helix 14
14
A
209 215Right-handed alpha
Helix 15
15
A
228 247Right-handed alpha
Helix 16
16
A
258 270Right-handed alpha
Helix 17
17
A
280 295Right-handed alpha
Helix 18
18
A
301 305Right-handed 310
Helix 19
19
A
313 329Right-handed alpha
Helix 20
20
A
333 340Right-handed alpha
Helix 21
21
A
362 366Right-handed 310
Helix 22
22
A
376 385Right-handed alpha
Helix 23
23
A
400 411Right-handed alpha
Helix 24
24
A
422 426Right-handed 310
Helix 25
25
A
429 436Right-handed alpha
Helix 26
26
A
466 469Right-handed 310
Helix 27
27
A
470 481Right-handed alpha
Helix 28
28
A
487 500Right-handed alpha
Helix 29
29
A
503 509Right-handed alpha
Helix 30
30
A
515 517Right-handed 310
Helix 31
31
A
518 537Right-handed alpha
Helix 32
32
A
548 555Right-handed alpha
Helix 33
33
B
1025 1029Right-handed 310
Helix 34
34
B
1036 1040Right-handed 310
Helix 35
35
B
1041 1048Right-handed alpha
Helix 36
36
B
1060 1074Right-handed alpha
Helix 37
37
B
1077 1092Right-handed alpha
Helix 38
38
B
1092 1103Right-handed alpha
Helix 39
39
B
1103 1112Right-handed alpha
Helix 40
40
B
1115 1123Right-handed alpha
Helix 41
41
B
1138 1140Right-handed 310
Helix 42
42
B
1142 1148Right-handed alpha
Helix 43
43
B
1172 1176Right-handed 310
Helix 44
44
B
1177 1192Right-handed alpha
Helix 45
45
B
1194 1196Right-handed 310
Helix 46
46
B
1209 1215Right-handed alpha
Helix 47
47
B
1228 1247Right-handed alpha
Helix 48
48
B
1258 1271Right-handed alpha
Helix 49
49
B
1278 1296Right-handed alpha
Helix 50
50
B
1301 1305Right-handed 310
Helix 51
51
B
1313 1329Right-handed alpha
Helix 52
52
B
1333 1340Right-handed alpha
Helix 53
53
B
1362 1366Right-handed 310
Helix 54
54
B
1376 1384Right-handed alpha
Helix 55
55
B
1400 1409Right-handed alpha
Helix 56
56
B
1422 1426Right-handed 310
Helix 57
57
B
1429 1436Right-handed alpha
Helix 58
58
B
1466 1469Right-handed 310
Helix 59
59
B
1470 1481Right-handed alpha
Helix 60
60
B
1488 1500Right-handed alpha
Helix 61
61
B
1503 1509Right-handed alpha
Helix 62
62
B
1515 1517Right-handed 310
Helix 63
63
B
1518 1537Right-handed alpha
Helix 64
64
B
1548 1556Right-handed alpha
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There are 6 sheets in PDB entry 1QR6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 136first strand
Strand 2
A
198 204parallel
Strand 3
A
157 161parallel
Strand 4
A
251 254parallel
Strand 5
A
275 277parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 349first strand
Strand 2
A
341 345anti-parallel
Strand 3
A
307 310parallel
Strand 4
A
388 391parallel
Strand 5
A
415 418parallel
Strand 6
A
442 445parallel
Strand 7
A
463 464parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 453first strand
Strand 2
A
459 460anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1133 1136first strand
Strand 2
B
1198 1204parallel
Strand 3
B
1157 1161parallel
Strand 4
B
1251 1254parallel
Strand 5
B
1275 1277parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1348 1349first strand
Strand 2
B
1341 1345anti-parallel
Strand 3
B
1307 1310parallel
Strand 4
B
1388 1391parallel
Strand 5
B
1415 1418parallel
Strand 6
B
1442 1445parallel
Strand 7
B
1463 1464parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1452 1453first strand
Strand 2
B
1459 1460anti-parallel
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