Analysis of interatomic Contacts of Structural Units in PDB entry:
1QWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QWZ entry

There is 1 chain in PDB entry 1QWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 10SER 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 1QWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 25Right-handed 310
Helix 2
2
A
29 53Right-handed alpha
Helix 3
3
A
57 66Right-handed alpha
Helix 4
4
A
136 145Right-handed 310
Helix 5
5
A
146 153Right-handed alpha
Helix 6
6
A
188 203Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1QWZ.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 76first strand
Strand 2
A
110 112parallel
Strand 3
A
124 129anti-parallel
Strand 4
A
217 222parallel
Strand 5
A
232 244anti-parallel
Strand 6
A
163 176anti-parallel
Strand 7
A
155 160anti-parallel
Strand 8
A
71 76anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il