Analysis of interatomic Contacts of Structural Units in PDB entry:
1QYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QYX entry

There is 1 chain in PDB entry 1QYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLY 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1QYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 24Right-handed alpha
Helix 2
2
A
38 41Right-handed 310
Helix 3
3
A
42 52Right-handed alpha
Helix 4
4
A
68 78Right-handed alpha
Helix 5
5
A
98 102Right-handed 310
Helix 6
6
A
103 115Right-handed alpha
Helix 7
7
A
115 133Right-handed alpha
Helix 8
8
A
144 146Right-handed 310
Helix 9
9
A
152 174Right-handed alpha
Helix 10
10
A
199 207Right-handed alpha
Helix 11
11
A
208 230Right-handed alpha
Helix 12
12
A
232 246Right-handed alpha
Helix 13
13
A
259 269Right-handed alpha
Helix 14
14
A
272 285Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1QYX.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
30 36parallel
Strand 3
A
3 7parallel
Strand 4
A
86 89parallel
Strand 5
A
135 142parallel
Strand 6
A
178 185parallel
Strand 7
A
252 254parallel
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