Analysis of interatomic Contacts of Structural Units in PDB entry:
1R0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1R0B entry

There are 12 chains in PDB entry 1R0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 310
B
 ALA 1LEU 310
C
 ALA 1LEU 310
G
 MET 1ASN 153
H
 MET 1ASN 153
I
 MET 1ASN 153
D
 ALA 1LEU 310
E
 ALA 1LEU 310
F
 ALA 1LEU 310
J
 MET 1ASN 153
K
 MET 1ASN 153
L
 MET 1ASN 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are119 helices in PDB entry 1R0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 15Right-handed 310
Helix 2
2
A
16 31Right-handed alpha
Helix 3
3
A
53 66Right-handed alpha
Helix 4
4
A
75 78Right-handed 310
Helix 5
5
A
79 85Right-handed alpha
Helix 6
6
A
87 96Right-handed alpha
Helix 7
7
A
110 117Right-handed alpha
Helix 8
8
A
134 150Right-handed alpha
Helix 9
9
A
166 177Right-handed alpha
Helix 10
10
A
189 193Right-handed 310
Helix 11
11
A
195 206Right-handed alpha
Helix 12
12
A
215 220Right-handed alpha
Helix 13
13
A
236 243Right-handed 310
Helix 14
14
A
250 257Right-handed 310
Helix 15
15
A
274 278Right-handed 310
Helix 16
16
A
284 291Right-handed alpha
Helix 17
17
A
291 305Right-handed alpha
Helix 18
18
B
11 15Right-handed 310
Helix 19
19
B
16 30Right-handed alpha
Helix 20
20
B
53 66Right-handed alpha
Helix 21
21
B
75 79Right-handed 310
Helix 22
22
B
87 96Right-handed alpha
Helix 23
23
B
110 117Right-handed alpha
Helix 24
24
B
134 149Right-handed alpha
Helix 25
25
B
166 177Right-handed alpha
Helix 26
26
B
189 193Right-handed 310
Helix 27
27
B
195 205Right-handed alpha
Helix 28
28
B
236 240Right-handed 310
Helix 29
29
B
251 255Right-handed 310
Helix 30
30
B
286 305Right-handed alpha
Helix 31
31
C
11 15Right-handed 310
Helix 32
32
C
16 33Right-handed alpha
Helix 33
33
C
53 65Right-handed alpha
Helix 34
34
C
75 79Right-handed 310
Helix 35
35
C
87 96Right-handed alpha
Helix 36
36
C
110 117Right-handed alpha
Helix 37
37
C
134 150Right-handed alpha
Helix 38
38
C
166 177Right-handed alpha
Helix 39
39
C
189 193Right-handed 310
Helix 40
40
C
195 206Right-handed alpha
Helix 41
41
C
214 219Right-handed alpha
Helix 42
42
C
220 222Right-handed 310
Helix 43
43
C
236 244Right-handed 310
Helix 44
44
C
250 255Right-handed 310
Helix 45
45
C
274 278Right-handed 310
Helix 46
46
C
284 291Right-handed alpha
Helix 47
47
C
291 305Right-handed alpha
Helix 48
48
G
25 33Right-handed alpha
Helix 49
49
G
67 72Right-handed alpha
Helix 50
50
G
73 75Right-handed 310
Helix 51
51
G
114 118Right-handed 310
Helix 52
52
G
148 150Right-handed 310
Helix 53
53
H
25 33Right-handed alpha
Helix 54
54
H
69 74Right-handed alpha
Helix 55
55
H
75 77Right-handed 310
Helix 56
56
H
148 150Right-handed 310
Helix 57
57
I
25 31Right-handed alpha
Helix 58
58
I
67 73Right-handed alpha
Helix 59
59
I
114 118Right-handed 310
Helix 60
60
D
11 15Right-handed 310
Helix 61
61
D
16 33Right-handed alpha
Helix 62
62
D
53 66Right-handed alpha
Helix 63
63
D
75 78Right-handed 310
Helix 64
64
D
79 84Right-handed alpha
Helix 65
65
D
87 99Right-handed alpha
Helix 66
66
D
110 117Right-handed alpha
Helix 67
67
D
134 150Right-handed alpha
Helix 68
68
D
166 177Right-handed alpha
Helix 69
69
D
189 193Right-handed 310
Helix 70
70
D
195 206Right-handed alpha
Helix 71
71
D
214 220Right-handed alpha
Helix 72
72
D
231 235Right-handed 310
Helix 73
73
D
236 244Right-handed 310
Helix 74
74
D
250 254Right-handed 310
Helix 75
75
D
274 280Right-handed 310
Helix 76
76
D
284 305Right-handed alpha
Helix 77
77
E
11 15Right-handed 310
Helix 78
78
E
16 33Right-handed alpha
Helix 79
79
E
53 66Right-handed alpha
Helix 80
80
E
75 78Right-handed 310
Helix 81
81
E
79 84Right-handed alpha
Helix 82
82
E
87 96Right-handed alpha
Helix 83
83
E
110 116Right-handed alpha
Helix 84
84
E
134 150Right-handed alpha
Helix 85
85
E
166 177Right-handed alpha
Helix 86
86
E
189 193Right-handed 310
Helix 87
87
E
195 206Right-handed alpha
Helix 88
88
E
214 218Right-handed 310
Helix 89
89
E
236 244Right-handed 310
Helix 90
90
E
250 255Right-handed 310
Helix 91
91
E
274 278Right-handed 310
Helix 92
92
E
286 291Right-handed alpha
Helix 93
93
E
291 305Right-handed alpha
Helix 94
94
F
11 15Right-handed 310
Helix 95
95
F
16 31Right-handed alpha
Helix 96
96
F
53 66Right-handed alpha
Helix 97
97
F
75 78Right-handed 310
Helix 98
98
F
79 84Right-handed alpha
Helix 99
99
F
87 96Right-handed alpha
Helix 100
100
F
110 117Right-handed alpha
Helix 101
101
F
134 150Right-handed alpha
Helix 102
102
F
166 177Right-handed alpha
Helix 103
103
F
189 193Right-handed 310
Helix 104
104
F
195 206Right-handed alpha
Helix 105
105
F
231 235Right-handed 310
Helix 106
106
F
236 243Right-handed 310
Helix 107
107
F
250 255Right-handed 310
Helix 108
108
F
274 278Right-handed 310
Helix 109
109
F
284 291Right-handed alpha
Helix 110
110
F
291 305Right-handed alpha
Helix 111
111
J
24 33Right-handed alpha
Helix 112
112
J
67 75Right-handed alpha
Helix 113
113
J
148 150Right-handed 310
Helix 114
114
K
25 33Right-handed alpha
Helix 115
115
K
34 38Right-handed 310
Helix 116
116
K
67 72Right-handed alpha
Helix 117
117
K
73 77Right-handed 310
Helix 118
118
L
70 74Right-handed 310
Helix 119
119
L
114 118Right-handed 310
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There are 29 sheets in PDB entry 1R0B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 73first strand
Strand 2
A
43 48parallel
Strand 3
A
101 106parallel
Strand 4
A
124 129parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 212first strand
Strand 2
A
183 187parallel
Strand 3
A
156 159parallel
Strand 4
A
224 226parallel
Strand 5
A
262 264parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 73first strand
Strand 2
B
43 48parallel
Strand 3
B
101 106parallel
Strand 4
B
124 129parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 212first strand
Strand 2
B
182 187parallel
Strand 3
B
155 159parallel
Strand 4
B
224 226parallel
Strand 5
B
262 264parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
69 73first strand
Strand 2
C
43 48parallel
Strand 3
C
101 106parallel
Strand 4
C
124 129parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 212first strand
Strand 2
C
183 187parallel
Strand 3
C
156 159parallel
Strand 4
C
224 226parallel
Strand 5
C
262 264parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
21 22first strand
Strand 2
G
54 61anti-parallel
Strand 3
G
42 50anti-parallel
Strand 4
J
42 49anti-parallel
Strand 5
J
55 59anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
86 87first strand
Strand 2
G
90 91anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
102 104first strand
Strand 2
G
124 128anti-parallel
Strand 3
G
135 138anti-parallel
Strand 4
G
144 146anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
16 17first strand
Strand 2
H
55 61anti-parallel
Strand 3
H
21 22anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
16 17first strand
Strand 2
H
55 61anti-parallel
Strand 3
H
42 49anti-parallel
Strand 4
K
42 48anti-parallel
Strand 5
K
56 62anti-parallel
Strand 6
K
15 21anti-parallel
Strand 7
K
82 84anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
86 87first strand
Strand 2
H
90 91anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
102 104first strand
Strand 2
H
124 126anti-parallel
Strand 3
H
133 138anti-parallel
Strand 4
H
129 130anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
102 104first strand
Strand 2
H
124 126anti-parallel
Strand 3
H
133 138anti-parallel
Strand 4
H
144 146anti-parallel
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There are 7 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
90 92first strand
Strand 2
I
83 87anti-parallel
Strand 3
I
15 22anti-parallel
Strand 4
I
56 61anti-parallel
Strand 5
I
42 48anti-parallel
Strand 6
L
43 48anti-parallel
Strand 7
L
56 58anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
125 130first strand
Strand 2
I
133 138anti-parallel
Strand 3
I
144 146anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
69 73first strand
Strand 2
D
43 48parallel
Strand 3
D
102 106parallel
Strand 4
D
124 129parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
209 211first strand
Strand 2
D
183 186parallel
Strand 3
D
156 159parallel
Strand 4
D
224 226parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
69 73first strand
Strand 2
E
43 48parallel
Strand 3
E
101 106parallel
Strand 4
E
124 129parallel
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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
208 211first strand
Strand 2
E
183 186parallel
Strand 3
E
156 159parallel
Strand 4
E
224 226parallel
Strand 5
E
262 264parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
69 73first strand
Strand 2
F
43 48parallel
Strand 3
F
101 106parallel
Strand 4
F
124 129parallel
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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
208 211first strand
Strand 2
F
182 187parallel
Strand 3
F
155 160parallel
Strand 4
F
224 226parallel
Strand 5
F
262 264parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
17 18first strand
Strand 2
J
83 84anti-parallel
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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
128 129first strand
Strand 2
J
134 137anti-parallel
Strand 3
J
144 146anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
86 87first strand
Strand 2
K
90 91anti-parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
102 104first strand
Strand 2
K
124 128anti-parallel
Strand 3
K
135 138anti-parallel
Strand 4
K
145 146anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
107 108first strand
Strand 2
K
151 152anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
103 104first strand
Strand 2
L
124 125anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
135 137first strand
Strand 2
L
144 146anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il