Analysis of interatomic Contacts of Structural Units in PDB entry:
1R0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1R0L entry

There are 4 chains in PDB entry 1R0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	LEU 386
B	GLN 3	LEU 386
C	MET 1	LEU 386
D	GLN 3	LEU 386

There are 84 helices in PDB entry 1R0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	14	27	Right-handed alpha
Helix 2	2	A	41	53	Right-handed alpha
Helix 3	3	A	61	63	Right-handed 310
Helix 4	4	A	64	72	Right-handed alpha
Helix 5	5	A	82	90	Right-handed alpha
Helix 6	6	A	102	105	Right-handed 310
Helix 7	7	A	106	116	Right-handed alpha
Helix 8	8	A	125	143	Right-handed alpha
Helix 9	9	A	150	160	Right-handed alpha
Helix 10	10	A	164	166	Right-handed 310
Helix 11	11	A	184	189	Right-handed alpha
Helix 12	12	A	190	191	Right-handed 310
Helix 13	13	A	192	197	Right-handed 310
Helix 14	14	A	207	214	Right-handed alpha
Helix 15	15	A	215	230	Right-handed alpha
Helix 16	16	A	232	234	Right-handed 310
Helix 17	17	A	266	276	Right-handed alpha
Helix 18	18	A	288	293	Right-handed alpha
Helix 19	19	A	306	318	Right-handed alpha
Helix 20	20	A	320	338	Right-handed alpha
Helix 21	21	A	344	357	Right-handed alpha
Helix 22	22	A	364	384	Right-handed alpha
Helix 23	23	B	14	27	Right-handed alpha
Helix 24	24	B	41	53	Right-handed alpha
Helix 25	25	B	61	63	Right-handed 310
Helix 26	26	B	64	72	Right-handed alpha
Helix 27	27	B	82	91	Right-handed alpha
Helix 28	28	B	103	105	Right-handed 310
Helix 29	29	B	106	116	Right-handed alpha
Helix 30	30	B	125	143	Right-handed alpha
Helix 31	31	B	150	160	Right-handed alpha
Helix 32	32	B	164	166	Right-handed 310
Helix 33	33	B	184	189	Right-handed alpha
Helix 34	34	B	192	198	Right-handed alpha
Helix 35	35	B	207	214	Right-handed alpha
Helix 36	36	B	215	230	Right-handed alpha
Helix 37	37	B	232	234	Right-handed 310
Helix 38	38	B	266	276	Right-handed alpha
Helix 39	39	B	288	293	Right-handed alpha
Helix 40	40	B	306	318	Right-handed alpha
Helix 41	41	B	320	338	Right-handed alpha
Helix 42	42	B	344	357	Right-handed alpha
Helix 43	43	B	364	384	Right-handed alpha
Helix 44	44	C	14	26	Right-handed alpha
Helix 45	45	C	41	53	Right-handed alpha
Helix 46	46	C	61	63	Right-handed 310
Helix 47	47	C	64	72	Right-handed alpha
Helix 48	48	C	82	91	Right-handed alpha
Helix 49	49	C	103	105	Right-handed 310
Helix 50	50	C	106	116	Right-handed alpha
Helix 51	51	C	125	143	Right-handed alpha
Helix 52	52	C	150	160	Right-handed alpha
Helix 53	53	C	164	166	Right-handed 310
Helix 54	54	C	184	189	Right-handed alpha
Helix 55	55	C	206	214	Right-handed alpha
Helix 56	56	C	215	230	Right-handed alpha
Helix 57	57	C	232	234	Right-handed 310
Helix 58	58	C	266	276	Right-handed alpha
Helix 59	59	C	288	293	Right-handed alpha
Helix 60	60	C	306	318	Right-handed alpha
Helix 61	61	C	320	338	Right-handed alpha
Helix 62	62	C	344	357	Right-handed alpha
Helix 63	63	C	364	384	Right-handed alpha
Helix 64	64	D	14	27	Right-handed alpha
Helix 65	65	D	41	53	Right-handed alpha
Helix 66	66	D	61	63	Right-handed 310
Helix 67	67	D	64	72	Right-handed alpha
Helix 68	68	D	82	91	Right-handed alpha
Helix 69	69	D	103	105	Right-handed 310
Helix 70	70	D	106	116	Right-handed alpha
Helix 71	71	D	125	143	Right-handed alpha
Helix 72	72	D	150	160	Right-handed alpha
Helix 73	73	D	164	166	Right-handed 310
Helix 74	74	D	184	189	Right-handed alpha
Helix 75	75	D	192	197	Right-handed alpha
Helix 76	76	D	206	214	Right-handed alpha
Helix 77	77	D	215	230	Right-handed alpha
Helix 78	78	D	232	234	Right-handed 310
Helix 79	79	D	266	276	Right-handed alpha
Helix 80	80	D	288	293	Right-handed alpha
Helix 81	81	D	306	318	Right-handed alpha
Helix 82	82	D	320	338	Right-handed alpha
Helix 83	83	D	344	357	Right-handed alpha
Helix 84	84	D	364	384	Right-handed alpha

There are 8 sheets in PDB entry 1R0L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	81	first strand
Strand 2	A	56	59	parallel
Strand 3	A	31	38	parallel
Strand 4	A	5	10	parallel
Strand 5	A	96	99	parallel
Strand 6	A	119	122	parallel
Strand 7	A	145	148	parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	240	first strand
Strand 2	A	168	175	parallel
Strand 3	A	246	252	anti-parallel
Strand 4	A	257	261	anti-parallel
Strand 5	B	257	261	anti-parallel
Strand 6	B	246	252	anti-parallel
Strand 7	B	168	175	anti-parallel
Strand 8	B	236	240	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	296	first strand
Strand 2	B	294	296	anti-parallel

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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	81	first strand
Strand 2	B	56	59	parallel
Strand 3	B	31	38	parallel
Strand 4	B	5	10	parallel
Strand 5	B	96	99	parallel
Strand 6	B	119	122	parallel
Strand 7	B	145	148	parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	81	first strand
Strand 2	C	56	59	parallel
Strand 3	C	31	38	parallel
Strand 4	C	5	10	parallel
Strand 5	C	96	99	parallel
Strand 6	C	119	122	parallel
Strand 7	C	145	148	parallel

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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	240	first strand
Strand 2	C	168	175	parallel
Strand 3	C	246	252	anti-parallel
Strand 4	C	257	261	anti-parallel
Strand 5	D	257	261	anti-parallel
Strand 6	D	246	252	anti-parallel
Strand 7	D	168	175	anti-parallel
Strand 8	D	236	240	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	294	296	first strand
Strand 2	D	294	296	anti-parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	81	first strand
Strand 2	D	56	59	parallel
Strand 3	D	31	38	parallel
Strand 4	D	5	10	parallel
Strand 5	D	96	99	parallel
Strand 6	D	119	122	parallel
Strand 7	D	145	148	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1R0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
1R0L