Analysis of interatomic Contacts of Structural Units in PDB entry:
1R0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1R0W entry

There are 4 chains in PDB entry 1R0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 390SER 670
B
 THR 389SER 670
C
 SER 388SER 670
D
 THR 390SER 670
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 1R0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
404 413Right-handed alpha
Helix 2
2
A
429 436Right-handed alpha
Helix 3
3
A
463 472Right-handed alpha
Helix 4
4
A
502 507Right-handed alpha
Helix 5
5
A
513 524Right-handed alpha
Helix 6
6
A
526 531Right-handed alpha
Helix 7
7
A
535 538Right-handed 310
Helix 8
8
A
549 564Right-handed alpha
Helix 9
9
A
579 590Right-handed alpha
Helix 10
10
A
606 612Right-handed alpha
Helix 11
11
A
629 637Right-handed alpha
Helix 12
12
A
637 646Right-handed alpha
Helix 13
13
A
649 653Right-handed 310
Helix 14
14
A
654 669Right-handed alpha
Helix 15
15
B
404 413Right-handed alpha
Helix 16
16
B
429 437Right-handed alpha
Helix 17
17
B
463 472Right-handed alpha
Helix 18
18
B
502 508Right-handed alpha
Helix 19
19
B
513 524Right-handed alpha
Helix 20
20
B
526 531Right-handed alpha
Helix 21
21
B
535 538Right-handed 310
Helix 22
22
B
549 564Right-handed alpha
Helix 23
23
B
579 590Right-handed alpha
Helix 24
24
B
606 613Right-handed alpha
Helix 25
25
B
629 637Right-handed alpha
Helix 26
26
B
637 646Right-handed alpha
Helix 27
27
B
649 653Right-handed 310
Helix 28
28
B
654 669Right-handed alpha
Helix 29
29
C
404 413Right-handed alpha
Helix 30
30
C
430 437Right-handed alpha
Helix 31
31
C
463 472Right-handed alpha
Helix 32
32
C
502 508Right-handed alpha
Helix 33
33
C
513 524Right-handed alpha
Helix 34
34
C
526 531Right-handed alpha
Helix 35
35
C
535 538Right-handed 310
Helix 36
36
C
542 546Right-handed 310
Helix 37
37
C
549 564Right-handed alpha
Helix 38
38
C
579 590Right-handed alpha
Helix 39
39
C
606 612Right-handed alpha
Helix 40
40
C
629 637Right-handed alpha
Helix 41
41
C
637 645Right-handed alpha
Helix 42
42
C
649 653Right-handed 310
Helix 43
43
C
654 669Right-handed alpha
Helix 44
44
D
404 412Right-handed alpha
Helix 45
45
D
430 437Right-handed alpha
Helix 46
46
D
463 472Right-handed alpha
Helix 47
47
D
502 508Right-handed alpha
Helix 48
48
D
513 524Right-handed alpha
Helix 49
49
D
526 531Right-handed alpha
Helix 50
50
D
535 538Right-handed 310
Helix 51
51
D
542 546Right-handed 310
Helix 52
52
D
549 564Right-handed alpha
Helix 53
53
D
579 590Right-handed alpha
Helix 54
54
D
606 613Right-handed alpha
Helix 55
55
D
629 637Right-handed alpha
Helix 56
56
D
637 645Right-handed alpha
Helix 57
57
D
649 653Right-handed 310
Helix 58
58
D
654 669Right-handed alpha
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There are 12 sheets in PDB entry 1R0W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 448first strand
Strand 2
A
392 400anti-parallel
Strand 3
A
479 483anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 491first strand
Strand 2
A
568 572parallel
Strand 3
A
599 603parallel
Strand 4
A
453 458parallel
Strand 5
A
615 620parallel
Strand 6
A
623 628anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 501first strand
Strand 2
A
540 541anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 448first strand
Strand 2
B
392 400anti-parallel
Strand 3
B
479 483anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
488 491first strand
Strand 2
B
568 572parallel
Strand 3
B
599 603parallel
Strand 4
B
453 458parallel
Strand 5
B
615 620parallel
Strand 6
B
623 628anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
500 501first strand
Strand 2
B
540 541anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
439 448first strand
Strand 2
C
392 400anti-parallel
Strand 3
C
477 483anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
488 491first strand
Strand 2
C
568 572parallel
Strand 3
C
599 603parallel
Strand 4
C
453 458parallel
Strand 5
C
615 620parallel
Strand 6
C
623 628anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
500 501first strand
Strand 2
C
540 541anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
439 448first strand
Strand 2
D
392 400anti-parallel
Strand 3
D
479 483anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
488 491first strand
Strand 2
D
568 572parallel
Strand 3
D
599 603parallel
Strand 4
D
453 458parallel
Strand 5
D
615 620parallel
Strand 6
D
623 628anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
500 501first strand
Strand 2
D
540 541anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il