Analysis of interatomic Contacts of Structural Units in PDB entry:
1R0X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1R0X entry

There are 4 chains in PDB entry 1R0X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 390	SER 670
B	THR 389	SER 670
C	SER 388	SER 670
D	THR 390	SER 670

There are 60 helices in PDB entry 1R0X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	404	410	Right-handed alpha
Helix 2	2	A	429	436	Right-handed alpha
Helix 3	3	A	463	472	Right-handed alpha
Helix 4	4	A	502	507	Right-handed alpha
Helix 5	5	A	513	524	Right-handed alpha
Helix 6	6	A	526	531	Right-handed alpha
Helix 7	7	A	535	538	Right-handed 310
Helix 8	8	A	542	546	Right-handed 310
Helix 9	9	A	549	564	Right-handed alpha
Helix 10	10	A	579	590	Right-handed alpha
Helix 11	11	A	606	612	Right-handed alpha
Helix 12	12	A	629	637	Right-handed alpha
Helix 13	13	A	637	645	Right-handed alpha
Helix 14	14	A	649	653	Right-handed 310
Helix 15	15	A	654	669	Right-handed alpha
Helix 16	16	B	404	410	Right-handed alpha
Helix 17	17	B	429	437	Right-handed alpha
Helix 18	18	B	463	472	Right-handed alpha
Helix 19	19	B	502	508	Right-handed alpha
Helix 20	20	B	513	524	Right-handed alpha
Helix 21	21	B	526	531	Right-handed alpha
Helix 22	22	B	535	538	Right-handed 310
Helix 23	23	B	542	546	Right-handed 310
Helix 24	24	B	549	564	Right-handed alpha
Helix 25	25	B	579	590	Right-handed alpha
Helix 26	26	B	606	613	Right-handed alpha
Helix 27	27	B	629	637	Right-handed alpha
Helix 28	28	B	637	646	Right-handed alpha
Helix 29	29	B	649	653	Right-handed 310
Helix 30	30	B	654	669	Right-handed alpha
Helix 31	31	C	404	410	Right-handed alpha
Helix 32	32	C	430	436	Right-handed alpha
Helix 33	33	C	463	472	Right-handed alpha
Helix 34	34	C	502	507	Right-handed alpha
Helix 35	35	C	513	524	Right-handed alpha
Helix 36	36	C	526	531	Right-handed alpha
Helix 37	37	C	535	538	Right-handed 310
Helix 38	38	C	542	546	Right-handed 310
Helix 39	39	C	549	564	Right-handed alpha
Helix 40	40	C	579	590	Right-handed alpha
Helix 41	41	C	606	612	Right-handed alpha
Helix 42	42	C	629	637	Right-handed alpha
Helix 43	43	C	637	646	Right-handed alpha
Helix 44	44	C	649	653	Right-handed 310
Helix 45	45	C	654	669	Right-handed alpha
Helix 46	46	D	404	410	Right-handed alpha
Helix 47	47	D	430	436	Right-handed alpha
Helix 48	48	D	463	472	Right-handed alpha
Helix 49	49	D	502	508	Right-handed alpha
Helix 50	50	D	513	524	Right-handed alpha
Helix 51	51	D	526	531	Right-handed alpha
Helix 52	52	D	535	538	Right-handed 310
Helix 53	53	D	542	546	Right-handed 310
Helix 54	54	D	549	564	Right-handed alpha
Helix 55	55	D	579	590	Right-handed alpha
Helix 56	56	D	606	613	Right-handed alpha
Helix 57	57	D	629	637	Right-handed alpha
Helix 58	58	D	637	645	Right-handed alpha
Helix 59	59	D	649	653	Right-handed 310
Helix 60	60	D	654	669	Right-handed alpha

There are 12 sheets in PDB entry 1R0X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	439	448	first strand
Strand 2	A	392	400	anti-parallel
Strand 3	A	479	483	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	491	first strand
Strand 2	A	568	572	parallel
Strand 3	A	599	603	parallel
Strand 4	A	453	458	parallel
Strand 5	A	615	620	parallel
Strand 6	A	623	628	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	501	first strand
Strand 2	A	540	541	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	439	448	first strand
Strand 2	B	392	400	anti-parallel
Strand 3	B	479	484	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	488	491	first strand
Strand 2	B	568	572	parallel
Strand 3	B	599	603	parallel
Strand 4	B	453	458	parallel
Strand 5	B	615	620	parallel
Strand 6	B	623	628	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	501	first strand
Strand 2	B	540	541	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	439	448	first strand
Strand 2	C	392	400	anti-parallel
Strand 3	C	479	483	anti-parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	491	first strand
Strand 2	C	568	572	parallel
Strand 3	C	599	603	parallel
Strand 4	C	453	458	parallel
Strand 5	C	615	620	parallel
Strand 6	C	623	628	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	500	501	first strand
Strand 2	C	540	541	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	439	448	first strand
Strand 2	D	392	400	anti-parallel
Strand 3	D	479	484	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	488	491	first strand
Strand 2	D	568	572	parallel
Strand 3	D	599	603	parallel
Strand 4	D	453	458	parallel
Strand 5	D	615	620	parallel
Strand 6	D	623	628	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	500	501	first strand
Strand 2	D	540	541	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1R0X

Analysis of interatomic Contacts of Structural Units in PDB entry:
1R0X